Job Description P0ACZ4 Confidence 99.72% Date Thu Jan 5 11:19:30 GMT 2012 Rank 30 Aligned Residues 69 % Identity 22% Template c2q0oA_ PDB info PDB header:transcription Chain: A: PDB Molecule:probable transcriptional activator protein trar; PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing Resolution 2.00 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	D	Q	Q	K	L	D	S	L	S	K	Q	E	I	S	V	M	R	Y	I	L	D	G	K	D	N	N	D	I	A	E	K	M	F	I	S	N	K	T	V	S	T	Y	K	S	R	L	M	E	K	L	E	C	K	S	L	M	D	L	Y	T	F	A	Q	R	N	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	V	L	N	P	K	Q	M	L	S	P	R	E	M	L	C	L	V	W	A	S	K	G	K	T	A	S	V	T	A	N	L	T	G	I	N	A	R	T	V	Q	H	Y	L	D	K	A	R	A	K	L	D	A	E	S	V	P	Q	L	V	A	I	A	K	D	R	G	L
Template Known Secondary structure		T					G	G	G	S														T	T																													T		S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions