 |
Job Description | P0ACZ4 | Confidence | 71.40% | Date | Thu Jan 5 11:19:30 GMT 2012 |
Rank | 337 | Aligned Residues | 33 |
% Identity | 18% | Template | c2jvlA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:trmbf1; |
PDBTitle: nmr structure of the c-terminal domain of mbf1 of trichoderma reesei
|
Resolution | UNK |
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | 180 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | G | K | D | N | N | D | I | A | E | K | M | F | I | S | N | K | T | V | S | T | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | S | R | L | M | E | K | L | E | C | K |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |
|   |
Template Sequence |   |
P | T | M | T | Q | A | E | L | G | K | E | I | G | E | T | A | A | T | V | A | S | Y | E | R | G | T | A | T | P | D | Q | N | I | L | S | K | M | E | R | V | L | N | V | K |
Template Known Secondary structure |   |
S |
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  | T | T | T |
| S |
|
|
|  |  |  |  |  |  |  |  |  | T | T | T |
| B |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|