|   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
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. | . | . | . | . | . | . | . | 70 | . | . | |
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. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
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. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
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Predicted Secondary structure |   |
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| . | . |
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|  |  |  |
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|  |  | . | . | . | . |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
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|  |  |  |  |  |  |
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| . | . | . | . | . | . |
Query SS confidence |   |
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| . |
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| . |
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| . |
. |
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| . |
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. |
. |
. |
. |
Query Sequence |   |
A | R | T | A | K | P | A | P | R | W | F | R | L | S | . |
. |
N | G | R | Q | V | N | L | A | D | W | K | . |
. |
. |
. |
V | V | L | F | M | Q | G | H | C | P | Y | C | H | Q | F | D | P | V | L | K | Q | L | A | Q | Q | Y | . |
. |
G | F | S | V | F | S | Y | T | L | D | G | Q | G | D | T | . |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . |
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|   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   | . | . |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   | . | . | . | . | . | . |
Alig confidence |   |
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| . | . |
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| . | . | . | . |
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| . | . |
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| . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |
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|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
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|   |
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|   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | L | R | Q | P | M | P | E | L | T | G | E | K | A | W | L | N | G | E | V | T | R | E | Q | L | I | G | E | K | P | T | L | I | H | F | W | S | I | S | C | H | L | C | K | E | A | M | P | Q | V | N | E | F | R | D | K | Y | Q | D | Q | L | N | V | V | A | V | H | M | P | R | S | E | D | D | L | D | P | G | K | I |
Template Known Secondary structure |   |
| T | T |
| B |
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| S |  |  |  | S |
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|  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |
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| S | T | T | T | S | S |  |  |  |  |
Template Predicted Secondary structure |   |
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|  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
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114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |
|  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | F | P | E | A | L | P | V | P | P | D | V | M | Q | T | F | F | P | N | I | P | V | A | T | P | T | T | F | L | V | N | V | N | T | L | E | A | L | P | L | L | Q | G | A | T | D | A | A | G | F | M | A | R | V | D | T | V |
Query Conservation |   |
. | . | . | . | . | . | . | . | . |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
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| . | . | . |
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| . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |
|   |   |   |
|
|
|   |   |
| . |   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
K | E | T | A | A | E | H | D | I | T | Q | P | I | F | V | D | S | D | H | A | L | T | D | A | F | E | . |
. |
. |
N | E | Y | V | P | A | Y | Y | V | F | D | K | T | G | . |
Q | L | R | H | F | Q | A | G | G | S | G | M | K | M | L | E | K | R | V | N | R | V |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|
| S |
|  |  |  |
| S | S |
|  |  |  |  |  | T |
| . | . | . |
|
|
| S | S |  |  |  |  |  |
| T | T |
| . | B |  |  |  |  |  |  | S |
| S | T | T |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
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  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
  |