 |
Job Description | P18035 | Confidence | 98.04% | Date | Thu Jan 5 11:36:40 GMT 2012 |
Rank | 227 | Aligned Residues | 128 |
% Identity | 14% | Template | c3umaC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:hypothetical peroxiredoxin protein; |
PDBTitle: crystal structure of a hypothetical peroxiredoxin protein frm2 sinorhizobium meliloti
|
Resolution | 2.20 Å |
|
 |
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
. | 100 | |
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|  |  |  |
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
| . |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
P | A | A | G | T | S | A | R | T | A | K | P | A | P | R | W | F | . |
. |
. |
R | L | S | N | G | R | Q | V | N | L | A | D | W | K | . |
. |
. |
. |
. |
. |
V | V | L | F | M | Q | G | H | C | P | Y | C | . |
H | Q | F | D | P | V | L | K | Q | L | A | Q | Q | Y | . |
. |
. |
G | F | . |
S | V | F | S | Y | T | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |
|
|   |
|   |   |   |   |
|   |   |
| . |   |   |   |   |
|   |
|   |   |   |   |   |   |   | . | . | . |
|   | . |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|
|
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |
|   |
|
|
|   |
|   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
Template Sequence |   |
Q | S | X | X | T | I | A | V | G | D | K | L | P | N | A | T | F | K | E | K | T | A | D | G | P | V | E | V | T | T | E | L | L | F | K | G | K | R | V | V | L | F | A | V | P | G | A | F | T | P | T | C | S | L | N | H | L | P | G | Y | L | E | N | R | D | A | I | L | A | R | G | V | D | D | I | A | V | V | A | V |
Template Known Secondary structure |   |
|
|
|
|
|
|
| T | T |
| B |
|
|
|
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |  | T |  |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|