 |
Job Description | P18035 | Confidence | 99.64% | Date | Thu Jan 5 11:36:40 GMT 2012 |
Rank | 46 | Aligned Residues | 122 |
% Identity | 20% | Template | c3p2aA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:putative thioredoxin-like protein; |
PDBTitle: crystal structure of thioredoxin 2 from yersinia pestis
|
Resolution | 2.19 Å |
|
 |
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | N | P | Q | G | M | A | T | Q | P | A | Q | P | A | A | G | T | S | A | R | T | A | K | P | A | P | R | W | F | R | L | S | N | G | R | Q | V | N | L | A | D | W | K | V | V | L | F | M | Q | G | H | C | P | Y | C | H | Q | F | D | P | V | L | K | Q | L | A | Q | Q | Y | G | F | S | V | F | S | Y | T | L | D | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
| . | . | . | . | . | . |
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
Template Sequence |   |
I | D | D | G | A | K | C | G | R | C | G | H | S | L | F | D | G | E | V | I | N | A | T | A | E | T | L | D | K | L | L | Q | D | D | L | P | X | . |
. |
. |
. |
. |
. |
V | I | D | F | W | A | P | W | C | G | P | C | R | S | F | A | P | I | F | A | E | T | A | A | E | R | A | G | K | V | R | F | V | K | V | N | T |
Template Known Secondary structure |   |
S |
| S |
|
| B |
| T | T | T |
|
| B | T | T |
|
|
|
|  |  |
|
| T | T | T |  |  |  |  | T | T |
| S | S |
|  | . | . | . | . | . | . |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | D | T | A | F | P | E | A | L | P | V | P | P | D | V | M | Q | T | F | F | P | N | I | P | V | A | T | P | T | T | F | L | V | N | V | N | T | L | E | A | L | P | L | L | Q | G | A | T | D | A | A | G | F | M | A | R | V | D | T | V | L | Q |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   | . | . | . |   |
|   |   |   |
|
|
|   |   |
|   | . |   |
| . |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | A | E | P | A | L | S | T | R | F | . |
. |
. |
R | I | R | S | I | P | T | I | X | L | Y | R | . |
N | G | . |
K | X | I | D | X | L | N | G | A | V | P | K | A | P | F | D | N | W | L | D | E | Q | L | S |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | T | T |
|  |  |  |  |  |  | T | . | . | . | T |
|
| S | S | S |  |  |  |  |  |  | . | T | T | . |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|  |  |  |  |  |  | . |
|
| . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
93 | . | . | . | . | . | . | 100 | . | . | |
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | |
. | . | |
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|