Job Description P18035 Confidence 98.02% Date Thu Jan 5 11:36:40 GMT 2012 Rank 230 Aligned Residues 100 % Identity 20% Template c3hd5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsba; PDBTitle: crystal structure of a thiol:disulfide interchange protein2 dsba from bordetella parapertussis Resolution 2.35 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	W	K	V	V	L	F	M	Q	G	H	C	P	Y	C	H	Q	F	D	P	V	L	K	Q	L	A	Q	Q	Y	G	F	S	V	F	S	Y	T	L	D	G	Q	G	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	I	E	V	L	E	F	F	A	Y	T	C	P	H	C	A	A	I	E	P	X	V	E	D	W	A	K	T	A	P	Q	D	V	V	L	K	Q	V	P	I	A	F	N	A	G	X	K	P	L	Q	Q	L	Y	Y	T	L	Q	A	L	E	R	P	D	L	H	P	K	V	F	T	A	I	H	T	E	R	K	R	L
Template Known Secondary structure		T										T	T																	T			T	T										S	S	G	G	G													T	T		T	T											T	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
																													114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	P	E	A	L	P	V	P	P	D	V	M	Q	T	F	F	P	N	I	P	V	A	T	P	T	T	F	L	V	N	V	N	T	L	E	A	L	P	L	L	Q	G	A	T	D	A	A	G	F	M	A	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.										.	.	.
Template Conservation																																														.	.	.										.	.	.
Template Sequence		F	D	K	K	A	X	G	E	W	A	A	S	Q	G	V	D	R	A	K	F	D	S	V	F	D	S	F	S	V	Q	T	Q	V	Q	R	A	S	Q	L	A	E	A	A	H	.	.	.	I	D	G	T	P	A	F	A	V	.	.	.	G	G	R	Y	X	T	S	P	V	L	A	G	N	D	Y	A	G	A	L	K	V
Template Known Secondary structure			S											T	T											T																		T	T	.	.	.			S	S	S					.	.	.	T	T	T					T	T	T	T	T	G	G	G	T	T
Template Predicted Secondary structure																																														.	.	.										.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	T	V	L	Q	M	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	Q	L	I	V	Q	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions