Job Description P18035 Confidence 98.28% Date Thu Jan 5 11:36:40 GMT 2012 Rank 222 Aligned Residues 99 % Identity 21% Template c3feuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative lipoprotein; PDBTitle: crystal structure of dsba-like thioredoxin domain vf_a0457 from vibrio2 fischeri Resolution 1.76 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	G	R	Q	V	N	L	A	D	W	K	V	V	L	F	M	Q	G	H	C	P	Y	C	H	Q	F	D	P	V	L	K	Q	L	A	Q	Q	Y	G	F	S	V	F	S	Y	T	L	D	G	Q	G	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		N	D	G	X	A	P	.	.	.	.	.	.	V	T	E	V	F	A	L	S	C	G	H	C	R	N	X	E	N	F	L	P	V	I	S	Q	E	A	G	T	D	I	G	K	X	H	I	T	F	N	Q	S	A	H	I	A	S	X	F	Y	Y	A	A	E	X	Q	V	D	G	A	P	D	H	A	F	X	E	D	L	F
Template Known Secondary structure		T	S				S	.	.	.	.	.	.							T	T								G	G	G									T	S									S	S	S														T	T	S	S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
																																									114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	P	E	A	L	P	V	P	P	D	V	M	Q	T	F	F	P	N	I	P	V	A	T	P	T	T	F	L	V	N	V	N	T	L	E	A	L	P	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.										.	.	.			.
Template Conservation																																																										.	.	.										.	.	.			.
Template Sequence		A	A	T	Q	X	G	E	G	T	T	L	T	E	Q	Q	E	A	Y	S	K	A	F	T	S	R	G	L	V	S	P	Y	D	F	N	E	E	Q	R	D	T	L	I	K	K	V	D	N	A	K	X	L	S	E	K	S	G	.	.	.	I	S	S	V	P	T	F	V	V	.	.	.	N	G	.	K	Y	N	V	L	I
Template Known Secondary structure					T			T	T	S															T	T	T				G	G	G																								T	.	.	.			S	S	S					.	.	.	T	T	.	T					G
Template Predicted Secondary structure																																																										.	.	.										.	.	.			.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.				.	.		.	.	160	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	A	T	D	A	A	G	F	M	A	R	V	D	T	V	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	H	D	D	P	K	Q	I	A	D	T	I	R	Y	L	L	E
Template Known Secondary structure		G	G		S	S													T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions