Return to main results Retrieve Phyre Job Id

Job DescriptionP18035
Confidence99.55%DateThu Jan 5 11:36:40 GMT 2012
Rank70Aligned Residues137
% Identity9%Templatec2yzhD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:probable thiol peroxidase; PDBTitle: crystal structure of peroxiredoxin-like protein from aquifex aeolicus
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.. .......80.........90........ .100.......
Predicted Secondary structure 

































.....






.


Query SS confidence 






































. . . . .

























.








Query Sequence  GMATQPAQPAAGTSARTAKPAPRWFRLSNGRQVNLADWK. . . . . VVLFMQGHCPYCHQFDPVLKQLAQQY. GFSVFSYTL
Query Conservation                               
         .....

 
    
  
    
 
       .
  
  
  
Alig confidence 






































.....

























.








Template Conservation               
 

  

 
 
    
    
    

  

  
    

 
      
              
  
Template Sequence  NLKGNPVTLVGPELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGMEGVDVTVVSM
Template Known Secondary structure  TTB
S



TTSB


TTS
SS

SS
S
TTSTTT
SSS
Template Predicted Secondary structure 




































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   108.110... ......120.........130...... ...140.........150...... ...160......
Predicted Secondary structure 





..........










......







.....


Query SS confidence 





. . . . . . . . . .






















. . . . . .



















. . . . .









Query Sequence  DGQGDT. . . . . . . . . . AFPEALPVPPDVMQTFFPNIPVA. . . . . . TPTTFLVNVNTLEALPLLQG. . . . . ATDAAGFMAR
Query Conservation 
     .......... 

                 
  ...... 


 

   
     
  
.....      
  
Alig confidence 





..........






















......










.







.....









Template Conservation                        
                       
  



  
. 
                 

  
Template Sequence  DLPFAQKRFCESFNIQNVTVASDFRYRDMEKYGVLIGEGALKGILARAVFIIDKEG. KVAYVQLVPEITEEPNYDEVVNK
Template Known Secondary structure  S
T

SS
TTT
GGGGGT
BB
SSTTTTSB


TTS.B
SBTTS


Template Predicted Secondary structure 

























.








Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140. ........150.........160....
 
   167..170.
Predicted Secondary structure 
Query SS confidence 




Query Sequence  VDTVL
Query Conservation 
   
Alig confidence 




Template Conservation 
  

Template Sequence  VKELI
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   165....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions