Return to main results Retrieve Phyre Job Id

Job DescriptionP18035
Confidence98.68%DateThu Jan 5 11:36:40 GMT 2012
Rank212Aligned Residues127
% Identity13%Templatec2wfcD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:peroxiredoxin 5; PDBTitle: crystal structure of peroxiredoxin 5 from arenicola marina
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.. .......70.. .......80...... ...90........ .100. ........
Predicted Secondary structure 














.




......






....

.


......
Query SS confidence 














.









. . . . . .













.











. . .


.







. . . . . .
Query Sequence  ARTAKPAPRWFRLSN. GRQVNLADWK. . . . . . VVLFMQGHCPYCHQ. FDPVLKQLAQQY. . . GFS. VFSYTLDG. . . . . .
Query Conservation                 .
         ......

 
    
  
  .  
 
       ...
  .
  
  
 ......
Alig confidence 














.









......













.











...


.







......
Template Conservation   


  


 
     
  
 
 
      


   
    
 
   
              
   
  

 
       
Template Sequence  KEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDA
Template Known Secondary structure 
TT
B



SSSTT
TTTS
S
TT
TTTT

SS
Template Predicted Secondary structure 
































Template SS confidence 















































































   31........40.........50.........60.........70.........80.........90.........100.........110
 
   110.........120.........130.. .......140.........150.........160.........170.....
Predicted Secondary structure  .....










.......














Query SS confidence  . . . . .






















. . . . . . .










































Query Sequence  . . . . . QGDTAFPEALPVPPDVMQTFFPN. . . . . . . IPVATPTTFLVNVNTLEALPLLQGATDAAGFMARVDTVLQMYG
Query Conservation  .....     

                ....... 
   


 

   
     
  
      
  

   
    
Alig confidence  .....






















.......














.


























Template Conservation               


       
 

              
   
  

. 
    
              

  
 
Template Sequence  WGKAHGADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVIEDG. VVTKVNVEPDGKGLTCSLAPNILSQLG
Template Known Secondary structure  TT
TTTS
TT
TT

SS

TT.
TTSS
SSTTS
Template Predicted Secondary structure 





























.









Template SS confidence 













































































   111........120.........130.........140.........150.........160 .........170.........180.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions