Job Description P18035 Confidence 99.52% Date Thu Jan 5 11:36:40 GMT 2012 Rank 80 Aligned Residues 131 % Identity 16% Template c1zofB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide-reductase; PDBTitle: crystal structure of alkyl hydroperoxide-reductase (ahpc)2 from helicobacter pylori Resolution 2.95 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																.	.	.	.	.	.																											.	.	.													.	.	.
Query SS confidence																																.	.	.	.	.	.																											.	.	.													.	.	.
Query Sequence		A	A	G	T	S	A	R	T	A	K	P	A	P	R	W	F	R	L	S	N	G	R	Q	V	N	L	A	D	W	K	.	.	.	.	.	.	V	V	L	F	M	Q	G	H	C	P	Y	C	H	Q	F	D	P	V	L	K	Q	L	A	Q	Q	Y	.	.	.	G	F	S	V	F	S	Y	T	L	D	G	Q	.	.	.
Query Conservation																																.	.	.	.	.	.																											.	.	.													.	.	.
Alig confidence																																.	.	.	.	.	.																											.	.	.													.	.	.
Template Conservation
Template Sequence		V	V	T	K	L	A	P	D	F	K	A	P	A	V	L	G	N	N	E	V	D	E	H	F	E	L	S	K	N	L	G	K	N	G	V	I	L	F	F	W	P	K	D	F	T	F	V	C	P	T	E	I	I	A	F	D	K	R	V	K	D	F	H	E	K	G	F	N	V	I	G	V	S	I	D	S	E	Q	V	H
Template Known Secondary structure			T	T	S	B											T	T	S								G	G	G	G			S	S								S		S	S		S	S																		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
															111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																												.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																												.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	T	A	F	P	E	A	L	P	V	P	P	D	V	M	Q	T	F	F	P	N	.	.	I	P	V	A	T	P	T	T	F	L	V	N	V	N	T	L	E	A	L	P	L	L	Q	G	A	T	D	.	.	.	.	A	A	G	F	M	A	R	V	D	T	V	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																												.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																.												.	.	.	.
Template Conservation																																																						.
Template Sequence		F	A	W	K	N	T	P	V	E	K	G	G	I	G	Q	V	S	F	P	M	V	A	D	I	T	K	S	I	S	R	D	Y	D	V	L	F	E	E	A	I	A	L	R	G	A	F	L	I	D	K	N	M	.	K	V	R	H	A	V	I	N	D	L	P	L	G	R	N	A	D	E	M	L	R	M	V	D	A	L	L
Template Known Secondary structure							S		G	G	G	T						S	S						T	T	S						T	T				T	T	T											T	T	S	.	B									S	S			T
Template Predicted Secondary structure																																																						.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		172	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	F	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		161	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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