Job Description P18035 Confidence 99.01% Date Thu Jan 5 11:36:40 GMT 2012 Rank 189 Aligned Residues 81 % Identity 7% Template c1sjiA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:calsequestrin, cardiac muscle isoform; PDBTitle: comparing skeletal and cardiac calsequestrin structures and2 their calcium binding: a proposed mechanism for coupled3 calcium binding and protein polymerization Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.
Query Sequence		V	V	L	F	M	Q	G	H	C	P	Y	C	H	Q	F	D	P	V	L	K	Q	L	A	Q	Q	Y	.	.	.	.	.	.	.	.	G	F	S	V	F	S	Y	T	L	D	G	Q	G	D	T	A	F	P	E	A	L	P	V	P	P	D	V	M	Q	T	F	F	P	N	I	P	V	A	T	P	T	T	F	L	V	N
Query Conservation																												.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		L	C	L	Y	Y	H	E	S	V	S	S	D	K	V	A	Q	K	Q	F	Q	L	K	E	I	V	L	E	L	V	A	Q	V	L	E	H	K	D	I	G	F	V	M	V	D	A	.	.	.	.	.	.	.	.	.	.	K	K	E	A	K	L	A	K	K	L	.	.	.	G	F	D	E	E	G	S	L	Y	V	L	K
Template Known Secondary structure										S		S	S	S	T	T	S																	G	G	G	S	S								T	.	.	.	.	.	.	.	.	.	.	T	T	T								.	.	.	T			S	T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.											.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	T	L	E	A	L	P	L	L	Q	G	A	T	D	A	A	G	F	M	A	R	V	D	T
Query Conservation
Alig confidence		.						.	.
Template Conservation		.						.	.
Template Sequence		.	G	D	R	T	I	.	.	E	F	D	G	E	F	A	A	D	V	L	V	E	F	L	L	D
Template Known Secondary structure		.	T	T				.	.				S													T
Template Predicted Secondary structure		.						.	.
Template SS confidence
			100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions