Job Description P76113 Confidence 100.00% Date Thu Jan 5 12:19:05 GMT 2012 Rank 4 Aligned Residues 315 % Identity 17% Template c4a10A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:octenoyl-coa reductase/carboxylase; PDBTitle: apo-structure of 2-octenoyl-coa carboxylase reductase cinf from2 streptomyces sp. Resolution 2.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.								.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	Q	K	Q	R	N	R	R	W	V	L	A	S	R	P	H	G	A	P	V	P	.	.	.	.	.	.	.	E	N	F	R	L	E	E	D	D	V	A	T	P	G	E	G	Q	V	L	L	R	T	V	Y	L	S	L	D	P	Y	M	R	G	R	M	S	D	E	P	S	Y	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	V	P	D	T	Y	L	A	L	H	L	R	A	E	D	A	D	M	F	K	G	V	A	D	K	D	V	R	K	S	L	R	L	G	E	V	P	M	P	E	L	A	P	D	E	V	L	V	A	V	M	A	S	S	I	N	Y	N	T	V	W	S	A	M	F	E	P	I	P	T	F	H	F	L	K	Q	N	A	R
Template Known Secondary structure		S				S									G	G	G	T	T	T	T	T	T		S	S																			T	T																				T	T		S	S											T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
											65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																															100	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	S	P	P	V	D	I	G	G	V	M	V	G	G	T	V	S	R	V	V	E	S	N	H	P	D	Y	Q	S	G	D	W	V	L	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	W	Q	D	Y
Query Conservation		.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		Q	G	G	W	A	T	R	H	D	Q	P	Y	H	V	L	G	S	D	C	S	G	V	V	V	R	.	.	T	G	I	G	V	R	R	W	K	P	G	D	H	V	I	V	H	P	A	H	V	D	E	Q	E	P	A	T	H	G	D	G	M	L	G	T	E	Q	R	A	W	G	F	E	T	N	F	G	G	L	A	E	Y
Template Known Secondary structure		T		G	G	G	G	G	G			S						S									.	.			T	T			S			T	T							S					T	T	S	G	G	G	G	T		T	T		S	T	T				T	T	T	T	S	S	S		S	S	B	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	S	S	G	D	D	L	V	K	L	G	D	H	P	Q	N	P	S	W	S	L	G	V	L	G	M	P	G	F	T	A	Y	M	G	L	L	D	I	G	Q	P	K	E	G	E	T	L	V	V	A	A	A	T	G	P	V	G	A	T	V	G	Q	I	G	K	L	K	G	C	R	V	V	G	V	A	G	G	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	V	R	A	S	Q	L	L	P	K	P	A	H	L	T	W	E	E	A	A	V	S	P	L	C	A	G	T	A	Y	R	M	L	V	S	D	R	G	A	Q	M	K	Q	G	D	I	V	L	I	W	G	A	S	G	G	L	G	S	Y	A	I	Q	F	V	K	N	G	G	G	I	P	V	A	V	V	S	S	A	Q
Template Known Secondary structure						G	G	G						T	T	S							T	S												T	S	T	T	T	T				T	T						T	T	T	T	S													T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.								.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		K	C	R	H	A	T	E	V	L	G	F	D	V	C	L	D	H	H	A	D	D	F	A	.	.	.	.	.	.	.	E	Q	L	A	K	A	C	P	K	G	I	D	I	Y	Y	E	N	V	G	G	K	V	F	D	A	V	L	P	L	L	N	T	S	A	R	I	P	V	C	G	L	V	S	S	Y	N	A	T	E	L
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	A	A	V	R	A	L	G	C	D	L	V	I	N	R	A	E	L	R	R	V	V	E	T	G	R	K	L	A	K	L	V	V	E	K	A	G	R	E	P	D	I	V	F	E	H	T	G	R	V	T	F	G	L	S	V	I	V	A	R	R	G	G	T	V	V	T	C	N	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T							T	T																					S	S			S						S		S	T									S		T	T								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	G	P	D	R	L	P	L	L	M	A	T	V	L	K	K	R	I	R	L	Q	G	F	I	I	A	Q	D	Y	G	H	R	I	H	E	F	Q	R	E	M	G	Q	W	V	K	E	D	K	I	H	Y	R	E	E	I	T	D	G	L	E	N	A	P	Q	T	F	I	G	L	L	K	G	K	N	F	G	K	V	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	R	Y	L	W	M	K	L	K	K	I	V	G	S	H	G	A	N	.	.	.	.	.	.	H	E	E	Q	Q	A	T	N	R	L	F	E	S	G	A	V	V	P	A	M	S	A	V	Y	P	L	A	E	A	A	E	A	C	R	V	V	Q	T	S	R	Q	V	G	K	V	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.					T	T	T								S			.	.	.	.	.	.													T	T	S	S										G	G	G										T	T		B	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template SS confidence
													348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.							.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		339	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	V	A	G	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	C	M	A	P	E
Template Known Secondary structure				S	S			S
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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