Return to main results Retrieve Phyre Job Id

Job DescriptionP76113
Confidence100.00%DateThu Jan 5 12:19:05 GMT 2012
Rank7Aligned Residues311
% Identity20%Templatec3uogB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of putative alcohol dehydrogenase from sinorhizobium2 meliloti 1021
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60. ........70.........80
Predicted Secondary structure 

























..










Query SS confidence 


























































. .


















Query Sequence  QQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLRTVYLSLDPYMRGRMSDE. . PSYSPPVDIGGVMVGGTVS
Query Conservation        

 

     
   
  
 
   
 
 
   





 
 

   
     
 ..     
 
 
 
  
 

 
Alig confidence 













.....







































..


















Template Conservation                ..... 
  
   
 
 
     





 
  
   
     
        
 
 
 
  
 

 
Template Sequence  XXSKWXQEWSTETV. . . . . APHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEA
Template Known Secondary structure 


SBS
T.....TTT






TT
GGG



SSB



Template Predicted Secondary structure 








.....




























Template SS confidence 















































































   0.........10... ......20.........30.........40.........50.........60.........70....
 
   81........90......... 100.........110.........120.........130...
Predicted Secondary structure 














...........................
















Query SS confidence 


















. . . . . . . . . . . . . . . . . . . . . . . . . . .

































Query Sequence  RVVESNHPDYQSGDWVLGY. . . . . . . . . . . . . . . . . . . . . . . . . . . SGWQDYDISSGDDLVKLGDHPQNPSWSLGVLGMP
Query Conservation    

  
     

 
   ...........................                                  
Alig confidence  ..
















...........................



























...


Template Conservation  ..

  
    




                              
  
             
        
 ...   
Template Sequence  . . VGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEAST. . . LPC
Template Known Secondary structure  ..
TT

S

TT

SSTT

SSS



SS





BTTTB



BSGGG

TTS
TT...TTT
Template Predicted Secondary structure  ..

















































...

Template SS confidence 















































































   75....80.........90.........100.........110.........120.........130.........140...... ...
 
   134.....140.........150.........160.........170.........180.........190.........200.........210...
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  GFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLDHHADDFAEQLAK
Query Conservation                                  
                                
              
Alig confidence 















































































Template Conservation                      

       
  
       
  
                
   
               
Template Sequence  AGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYAL
Template Known Secondary structure  TTTT


TT
SSSTT
S
T
STTTS
Template Predicted Secondary structure 























Template SS confidence 















































































   150.........160.........170.........180.........190.........200.........210.........220.........
 
   214.....220.........230.........240.........250.........260.........270.........280.........290...
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  ACPKGIDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIH
Query Conservation                              
  
                                 
 
            
Alig confidence 






































..........























......
Template Conservation         

 
  
          
   
  
       ..........            
   
 
     ...... 
Template Sequence  TGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG. . . . . . . . . . FEVSGPVGPLLLKSPVVQGISVGH. . . . . . R
Template Known Secondary structure  TTTS
TTSS



TT..........





T






......
Template Predicted Secondary structure 















..........










......
Template SS confidence 















































































   230.........240.........250.........260........ .270.........280.........290.. .
 
   294.....300.........310.........320.........330.........340
Predicted Secondary structure 












Query SS confidence 














































Query Sequence  EFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNFGKVVIR
Query Conservation          

  
 
   
     
     
   
  
   




 
Alig confidence 







































.





Template Conservation          

  
 
   
     
     
      
  .




 
Template Sequence  RALEDLVGAVDRLGLKPVIDXRYKFTEVPEALAHLDRGPF. GKVVIE
Template Known Secondary structure  T



GGGTTS

S.S
Template Predicted Secondary structure 











.
Template SS confidence 














































   294.....300.........310.........320.........330... ......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions