Job Description P76113 Confidence 100.00% Date Thu Jan 5 12:19:05 GMT 2012 Rank 29 Aligned Residues 317 % Identity 18% Template c3jynA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structures of pseudomonas syringae pv. tomato dc30002 quinone oxidoreductase complexed with nadph Resolution 2.01 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		N	R	R	W	V	L	A	S	R	P	H	G	A	P	V	P	E	N	F	R	L	E	E	D	D	V	A	T	P	G	E	G	Q	V	L	L	R	T	V	Y	L	S	L	D	P	Y	M	R	G	R	M	S	D	E	P	S	Y	S	.	P	P	V	D	I	G	G	V	M	V	G	G	T	V	S	R	V	V	E	S	N
Query Conservation																																																												.
Alig confidence										.				.	.	.																																												.																.	.
Template Conservation										.				.	.	.																																																												.	.
Template Sequence		A	K	R	I	Q	F	S	T	.	V	G	G	.	.	.	P	E	V	L	E	Y	V	D	F	E	P	E	A	P	G	P	Q	A	V	V	V	R	N	K	A	I	G	L	N	F	I	D	T	Y	Y	R	S	G	L	Y	P	A	P	F	L	P	S	G	L	G	A	E	G	A	G	V	V	E	A	.	.	V	G	D	E
Template Known Secondary structure							B	S	S	.		S	S	.	.	.	G	G	G													T	T																					T	S	S			S	S	S	S	B													.	.			T	T
Template Predicted Secondary structure										.				.	.	.																																																												.	.
Template SS confidence
		2	.	.	.	.	.	.	.		10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.
		87	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		H	P	D	Y	Q	S	G	D	W	V	.	.	L	G	Y	S	G	W	Q	D	Y	D	I	S	S	G	D	D	L	V	K	L	G	D	H	P	Q	N	P	S	W	S	L	G	V	L	G	M	P	G	F	T	A	Y	M	G	L	L	D	I	G	Q	P	K	E	G	E	T	L	V	V	A	A	A	T	G	P	V	G	A
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		V	T	R	F	K	V	G	D	R	V	A	Y	G	T	G	P	L	G	A	Y	S	E	V	H	V	L	P	E	A	N	L	V	K	L	A	D	S	V	S	F	E	Q	A	A	A	L	M	L	K	G	L	T	V	Q	Y	L	L	R	Q	T	Y	Q	V	K	P	G	E	I	I	L	F	H	A	A	A	G	G	V	G	S
Template Known Secondary structure				S			T	T						S	S	S	S	S			S	B	S						G	G	G						T	T	S																					T	T	S				T	T						S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	G	Q	I	G	K	L	K	G	C	R	V	V	G	V	A	G	G	A	E	K	C	R	H	A	T	E	V	L	G	F	D	V	C	L	D	H	H	A	D	D	F	A	E	Q	L	A	K	A	C	P	K	G	I	D	I	Y	Y	E	N	V	G	G	K	V	F	D	A	V	L	P	L	L	N	T	S	A	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	C	Q	W	A	K	A	L	G	A	K	L	I	G	T	V	S	S	P	E	K	A	A	H	A	K	A	L	G	A	W	E	T	I	D	Y	S	H	E	D	V	A	K	R	V	L	E	L	T	D	G	K	K	C	P	V	V	Y	D	G	V	G	Q	D	T	W	L	T	S	L	D	S	V	A	P	R	G	L	V
Template Known Secondary structure											T								S	S											T		S					T	T	T	S										T	T	T									S	S		G	G	G						T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		P	V	C	G	L	V	S	S	Y	N	A	T	E	L	P	P	G	P	D	R	L	P	L	L	M	A	T	V	L	K	K	R	I	R	L	Q	G	F	I	I	A	Q	.	.	.	D	Y	G	H	R	I	H	E	F	Q	R	E	M	G	Q	W	V	K	E	D	K	I	H	Y	R	E	E	I	T	D	G	L	E	N	A
Query Conservation																																												.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	F	G	N	A	S	G	.	.	.	.	.	.	.	.	.	.	P	V	S	G	V	N	L	G	I	L	A	Q	K	D	S	V	Y	V	T	R	P	T	L	G	S	Y	A	N	N	A	Q	N	L	Q	T	M	A	D	E	L	F	D	M	L	A	S	G	K	L	K	V	D	G	I	E	Q	Y	A	L	K	D	A
Template Known Secondary structure							T	T		.	.	.	.	.	.	.	.	.	.				S			T						T	T	S												S		S	T	T															T	T	S	S										G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.											.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	T	F	I	G	L	L	K	G	K	N	F	G	K	V	V	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	Q	I	E	L	S	A	R	R	T	T	G	S	T	I	L	I
Template Known Secondary structure										T	T				S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions