Job Description P76113 Confidence 99.76% Date Thu Jan 5 12:19:05 GMT 2012 Rank 83 Aligned Residues 310 % Identity 18% Template c2vz8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase Resolution 3.2 Å

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		24	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																																						.
Query SS confidence														.	.	.																																																						.
Query Sequence		E	N	F	R	L	E	E	D	D	V	A	T	.	.	.	P	G	E	G	Q	V	L	L	R	T	V	Y	L	S	L	D	P	Y	M	R	G	R	M	S	D	E	P	S	Y	S	P	P	V	D	I	G	G	V	M	V	G	G	T	V	S	R	V	V	E	S	N	H	P	.	D	Y	Q	S	G	D	W	V	L	G	Y
Query Conservation														.	.	.																																																						.
Alig confidence														.	.	.																											.	.	.															.	.									.
Template Conservation																																											.	.	.															.	.
Template Sequence		S	S	I	R	W	V	C	S	P	L	H	Y	A	L	P	A	S	C	Q	D	R	L	C	S	V	Y	Y	T	S	L	N	F	R	D	V	M	L	A	T	G	K	.	.	.	L	S	P	D	S	I	P	G	K	W	L	T	R	D	.	.	C	M	L	G	M	E	F	S	G	R	D	A	S	G	R	R	V	M	G	M
Template Known Secondary structure		T	S							G	G	G	G				T	T	S	T	T	T																			T	S	.	.	.	S		G	G	G			S			S		S	S	.	.												T	T
Template Predicted Secondary structure																																											.	.	.															.	.
Template SS confidence
		1542	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.				.	.	.	.	.	.	.	1590	.	.	.	.	.	.			.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.
		100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		S	G	W	.	Q	D	Y	D	I	S	S	G	D	D	L	V	K	L	G	D	H	P	Q	N	P	S	W	S	L	G	V	L	G	M	P	G	F	T	A	Y	M	G	L	L	D	I	G	Q	P	K	E	G	E	T	L	V	V	A	A	A	T	G	P	V	G	A	T	V	G	Q	I	G	K	L	K	G	C	R	V	V
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		V	P	A	E	G	L	A	T	S	V	L	L	L	Q	H	A	T	W	E	V	P	S	T	W	T	L	E	E	A	A	S	V	P	I	V	Y	T	T	A	Y	Y	S	L	V	V	R	G	R	M	Q	P	G	E	S	V	L	I	H	S	G	S	G	G	V	G	Q	A	A	I	A	I	A	L	S	R	G	C	R	V	F
Template Known Secondary structure			S	S			S	B	S						G	G	G						T	T	S						T	T													T	T	T	T				T	T								S	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		1617	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		G	V	A	G	G	A	E	K	C	R	H	A	T	E	.	.	.	.	V	L	G	F	D	V	C	L	D	H	H	A	D	D	F	A	E	Q	L	A	K	A	C	P	K	G	I	D	I	Y	Y	E	N	V	G	G	K	V	F	D	A	V	L	P	L	L	N	T	S	A	R	I	P	V	C	G	L	V	S	S	Y	N
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.
Template Conservation
Template Sequence		T	T	V	G	S	A	E	K	R	A	Y	L	Q	A	R	F	P	Q	L	D	E	T	C	F	A	N	S	R	D	T	S	F	E	Q	H	V	L	R	H	T	A	G	K	G	V	D	L	V	L	N	S	L	A	E	E	K	L	Q	A	S	V	R	C	L	A	Q	H	G	R	F	L	E	I	G	K	F	D	L	S	N
Template Known Secondary structure					S													T	T			S	T	T				S	S	S	S									T	T	T	T																				T	T																	T
Template Predicted Secondary structure
Template SS confidence
		1697	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	E	L	P	P	G	P	D	R	L	P	L	L	M	A	T	V	L	K	K	R	I	R	L	Q	G	F	I	I	A	Q	D	Y	G	H	R	I	H	E	F	Q	R	E	M	G	Q	W	V	K	E	D	K	I	H	Y	R	E	E	I	T	D	G	L	E	N	A	P	Q	T	F	I	G	L	L	K	G	K	N	F
Query Conservation
Alig confidence																										.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		N	H	A	L	G	M	A	V	F	L	K	N	V	T	F	H	G	I	L	L	D	S	L	F	.	.	.	.	.	.	.	E	E	G	G	A	T	W	Q	E	V	S	E	L	L	K	A	G	I	Q	E	G	V	V	Q	P	L	K	C	T	V	F	P	R	T	K	V	E	A	A	F	R	Y	M	A	Q	G	K	H	I
Template Known Secondary structure		T					T	T	G	G	G	G	T								T					.	.	.	.	.	.	.	T	S																	T	T	T		S										S	S	T										T	T			S
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		1777	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800								.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	V	V	I	R	V	A	G	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	V	V	I	Q	V	R	E	E	E
Template Known Secondary structure		S						S	S
Template Predicted Secondary structure
Template SS confidence
		1850	.	.	.	.	.	.	.	.	.	1860

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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