Phyre 2 alignment of P76113 with c2hcyD

Job Description P76113
Confidence 100.00% Date Thu Jan 5 12:19:05 GMT 2012

Rank 24 Aligned Residues 314

% Identity 16% Template c2hcyD_

PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 1; PDBTitle: yeast alcohol dehydrogenase i, saccharomyces cerevisiae fermentative2 enzyme

Resolution 2.44 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence	K	Q	R	N	R	R	W	V	L	A	S	R	P	H	G	A	P	V	P	E	N	F	R	L	E	E	D	D	V	A	T	P	G	E	G	Q	V	L	L	R	T	V	Y	L	S	L	D	P	Y	M	R	G	R	M	S	D	E	P	S	Y	.	.	S	P	P	V	D	I	G	G	V	M	V	G	G	T	V	S	R	V
Query Conservation																																																													.	.
Alig confidence													.	.	.	.	.	.																																											.	.																	.	.
Template Conservation													.	.	.	.	.	.																																																													.	.
Template Sequence	P	E	T	Q	K	G	V	I	F	Y	E	S	.	.	.	.	.	.	H	G	K	L	E	Y	K	D	I	P	V	P	K	P	K	A	N	E	L	L	I	N	V	K	Y	S	G	V	C	H	T	D	L	H	A	W	H	G	D	W	P	L	P	V	K	L	P	L	V	G	G	H	E	G	A	G	V	V	V	G	.	.
Template Known Secondary structure		S								S	S	T	.	.	.	.	.	.	T															T	T													T								T		S	S	S				S	S					S									.	.
Template Predicted Secondary structure													.	.	.	.	.	.																																																													.	.
Template SS confidence
	3	.	.	.	.	.	.	10	.	.	.	.							.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

	83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																													.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	V	E	S	N	H	P	D	Y	Q	S	G	D	W	V	L	G	Y	S	G	W	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	D	I	S	S	G	D	D	L	V	K	L	G	D	H	P	Q	N	P	S	W	S	L	G	V	L	G	M	P	G
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	M	G	E	N	V	K	G	W	K	I	G	D	Y	A	G	I	K	W	L	N	G	S	C	M	A	C	E	Y	C	E	L	G	N	E	S	N	C	P	H	A	D	L	S	G	Y	T	H	D	G	S	F	Q	Q	Y	A	T	A	D	A	V	Q	A	A	H	I	P	Q	G	T	D	L	A	Q	V	A	P	I	L	C	A
Template Known Secondary structure			T	T			S			T	T							S						S	S	S	T	T	G	G	G	T		G	G	G		T	T				B	T	T	T	B			S	S	B	S	S					T	T	T	S					T	T							G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
	75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

	135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	F	T	A	Y	M	G	L	L	D	I	G	Q	P	K	E	G	E	T	L	V	V	A	A	A	T	G	P	V	G	A	T	V	G	Q	I	G	K	L	K	G	C	R	V	V	G	V	A	G	G	A	E	K	C	R	H	A	T	E	V	L	G	F	D	V	C	L	D	H	H	A	D	D	F	A	E	Q	L	A	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence	G	I	T	V	Y	K	A	L	K	S	A	N	L	M	A	G	H	W	V	A	I	S	G	A	A	G	G	L	G	S	L	A	V	Q	Y	A	K	A	M	G	Y	R	V	L	G	I	D	G	G	E	G	K	E	E	L	F	R	S	I	G	G	E	V	F	I	D	F	T	K	E	K	D	I	V	G	A	V	L	K	A
Template Known Secondary structure											T	T			T	T							T	T	T	S													T	T									S	T	T							T	T	T		S					T	T	T		S
Template Predicted Secondary structure
Template SS confidence
	155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

	215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	C	P	K	G	I	D	I	Y	Y	E	N	V	G	G	K	V	F	D	A	V	L	P	L	L	N	T	S	A	R	I	P	V	C	G	L	V	S	S	Y	N	A	T	E	L	P	P	G	P	D	R	L	P	L	L	M	A	T	V	L	K	K	R	I	R	L	Q	G	F	I	I	A	Q	D	Y	G	H	R	I	H	E
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence	T	D	G	G	A	H	G	V	I	N	V	S	V	S	E	A	A	I	E	A	S	T	R	Y	V	R	A	N	G	T	T	V	L	V	.	.	.	.	.	.	.	.	.	G	M	P	A	G	A	K	C	C	S	D	V	F	N	Q	V	V	K	S	I	S	I	V	G	S	Y	V	G	N	.	.	.	.	.	.	R	A
Template Known Secondary structure		T	S										S																						.	.	.	.	.	.	.	.	.				T	T													T	T											.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
	235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.										.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.							.	.

	295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	F	Q	R	E	M	G	Q	W	V	K	E	D	K	I	H	Y	R	E	E	I	T	D	G	L	E	N	A	P	Q	T	F	I	G	L	L	K	G	K	N	F	G	K	V	V	I	R	V	A
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence	D	T	R	E	A	L	D	F	F	A	R	G	L	V	K	S	P	I	.	K	V	V	G	L	S	T	L	P	E	I	Y	E	K	M	E	K	G	Q	I	V	G	R	Y	V	V	D	T	S
Template Known Secondary structure											T	T							.					G	G	G									T	T	T				S						T	T
Template Predicted Secondary structure																			.
Template SS confidence
	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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