Job Description P76113 Confidence 100.00% Date Thu Jan 5 12:19:05 GMT 2012 Rank 47 Aligned Residues 310 % Identity 13% Template c2cdaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: sulfolobus solfataricus glucose dehydrogenase 1 in complex2 with nadp Resolution 2.28 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																				.											.
Query SS confidence																				.											.
Query Sequence		N	R	R	W	V	L	A	S	R	P	H	G	A	P	V	P	E	N	.	F	R	L	E	E	D	D	V	A	T	.	P	G	E	G	Q	V	L	L	R	T	V	Y	L	S	L	D	P	Y	M	R	G	R	M	S	D	E	P	S	Y	S	P	P	V	D	I	G	G	V	M	V	G	G	T	V	S	R	V	V	E	S
Query Conservation																				.											.
Alig confidence										.	.	.	.	.	.	.				.											.																																														.	.
Template Conservation										.	.	.	.	.	.	.																																																													.	.
Template Sequence		M	K	A	I	I	V	K	P	.	.	.	.	.	.	.	P	N	A	G	V	Q	V	K	D	V	D	E	K	K	L	D	S	Y	G	K	I	K	I	R	T	I	Y	N	G	I	C	G	T	D	R	E	I	V	N	G	K	L	K	G	K	D	F	L	V	L	G	H	E	A	I	G	V	V	E	E	.	.	S	Y	H
Template Known Secondary structure									T	.	.	.	.	.	.	.	T	S										G	G	G	S				S	S																			T	T						S						S							S	S	.	.			S
Template Predicted Secondary structure										.	.	.	.	.	.	.																																																													.	.
Template SS confidence
		1	.	.	.	.	.	.	.								.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.
		86	.	.	.	90	.	.	.	.	.	.	.																																		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	H	P	D	Y	Q	S	G	D	W	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	S	G	W	Q	D	Y	D	I	S	S	G	D	D	L	V	K	L	G	D	H	P	Q	N	P	S	W	S	L	G	V	L	G	M
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.
Template Sequence		G	.	.	.	F	S	Q	G	D	L	V	M	P	V	N	R	R	G	C	G	I	C	R	N	C	L	V	G	R	P	D	F	C	E	T	G	E	F	G	E	A	G	I	H	K	M	D	G	F	M	R	E	W	W	Y	D	D	P	K	Y	L	V	K	I	P	K	S	I	E	D	I	G	I	L	A	Q	P	L	A	D
Template Known Secondary structure		S	.	.	.			T	T							S					S	S	S					T	T		G	G	G		S	S	S						T	T	B					S		B	S						G	G	G						G	G	G	T	T	T	G	G	G
Template Predicted Secondary structure			.	.	.
Template SS confidence
		78				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
											133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	P	G	F	T	A	Y	M	G	L	L	D	I	G	Q	P	K	E	G	E	T	L	V	V	A	A	A	T	G	P	V	G	A	T	V	G	Q	I	G	K	L	K	G	C	R	V	V	G	V	A	G	G	A	E	K	C	R	H	A	T	E	V	L	G	F	D	V	C	L	D	H	H
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																									.
Template Conservation																																			.
Template Sequence		I	E	K	S	I	E	E	I	L	E	V	Q	K	R	V	P	V	W	T	C	D	D	G	T	L	N	C	R	K	V	L	V	V	.	G	T	G	P	I	G	V	L	F	T	L	L	F	R	T	Y	G	L	E	V	W	M	A	N	R	R	E	P	T	E	V	E	Q	T	V	I	E	E	T	K	T	N	Y	Y	N	S
Template Known Secondary structure													G	G	G	S	S			S		T	T	S	S	S	T	T							.																T	T								S	S														T
Template Predicted Secondary structure																																			.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	D	F	A	E	Q	L	A	K	A	C	P	K	G	I	D	I	Y	Y	E	N	V	G	G	K	V	F	D	A	V	L	P	L	L	N	T	S	A	R	I	P	V	C	G	L	V	S	S	Y	N	A	T	E	L	P	P	G	P	D	R	L	P	L	L	M	A	T	V	L	K	K	R	I	R	L	Q	G	F	I
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.
Template Sequence		S	N	G	Y	D	K	L	K	D	S	V	G	K	F	D	V	I	I	D	A	T	G	A	D	V	N	I	L	G	N	V	I	P	L	L	G	R	N	G	V	L	G	L	F	G	F	S	T	S	G	S	V	.	.	.	.	.	.	.	P	L	D	Y	K	T	L	Q	E	I	V	H	T	N	K	T	I	I	G	L	V
Template Known Secondary structure		T	T		S							T													B	T							G	G	G											S				B				.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.								.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.							.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		I	A	Q	D	Y	G	H	R	I	H	E	F	Q	R	E	M	G	Q	W	V	K	E	D	.	.	.	.	.	.	K	I	H	Y	R	E	E	I	T	D	G	L	E	N	A	P	Q	T	F	I	G	L	L	K	G	K	N	F	G	K	V	V	I	R	V	A	G	D
Query Conservation																									.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.															.	.	.	.	.	.																												.
Template Conservation					.	.	.	.	.	.																																																.
Template Sequence		N	G	Q	.	.	.	.	.	.	K	P	H	F	Q	Q	A	V	V	H	L	A	S	W	K	T	L	Y	P	K	A	A	K	M	L	I	T	K	T	V	S	I	N	D	E	K	E	L	L	K	V	L	R	E	K	E	H	.	G	E	I	K	I	R	I	L	W	E
Template Known Secondary structure					.	.	.	.	.	.																		S					T	T	S							T	T														T	.	T
Template Predicted Secondary structure					.	.	.	.	.	.																																																.
Template SS confidence
		307	.	.							310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions