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Job DescriptionP76113
Confidence100.00%DateThu Jan 5 12:19:05 GMT 2012
Rank49Aligned Residues316
% Identity15%Templatec1vj0B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: crystal structure of alcohol dehydrogenase (tm0436) from thermotoga2 maritima at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.... .....70.........80....
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Query Sequence  QRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLRTVYLSLDPYMRGRMSDEPSY. SPPVDIGGVMVGGTVSRVVE
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Template Sequence  LKAHAMVLEK. FNQP. . . . . LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVE. . VN
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S.TTS
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   4.....10... .... ..20.........30.........40.........50.........60.........70... ..
 
   85... .90.........100 .........110.........120.
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Query Sequence  SNHP. . . . . DYQSGDWVLGYS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GWQDYDISSGDDLVKLGDHPQ
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Template Sequence  GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEK
Template Known Secondary structure  S

B
TTS
B

TT

S

SSSTS

GGG
TT
TTTT

SSSTT


SSSBS
TT


TT
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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   122.......130.........140.........150.........160.........170.........180.........190.........200.
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Query Sequence  NPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLD
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Template Sequence  DDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNR
Template Known Secondary structure  S
TTT
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BT


STTBSS
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   156...160.........170.........180.........190.........200.........210.........220.........230.....
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  HHADDFAEQLAKACPKGIDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQG
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Template Sequence  RETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQ. . . . DPVPFKVYEWLVLKNATFKG
Template Known Secondary structure  TTS
TTTS

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   236...240.........250.........260.........270.........280.........290. ........300.........310.
 
   282.......290.........300......... 310.........320.........330.........340
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Query Sequence  FIIAQDYGHRIHEFQREMGQWVKEDKIH. . YREEITDGLENAPQTFIGLLKGKNFGKVVIR
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Template Sequence  IWVSD. . . . . . TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREA. LKVILY
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GGG

GGGTTS
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   312.... ...320.........330.........340.........350......... 360.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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