Job Description P76113 Confidence 100.00% Date Thu Jan 5 12:19:05 GMT 2012 Rank 30 Aligned Residues 316 % Identity 18% Template c1qorA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of escherichia coli quinone2 oxidoreductase complexed with nadph Resolution 2.20 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		R	R	W	V	L	A	S	R	P	H	G	A	P	V	P	E	N	F	R	L	E	E	D	D	V	A	T	P	G	E	G	Q	V	L	L	R	T	V	Y	L	S	L	D	P	Y	M	R	G	R	M	S	D	E	P	S	Y	S	.	P	P	V	D	I	G	G	V	M	V	G	G	T	V	S	R	V	V	E	S	N	H
Query Conservation																																																											.
Alig confidence									.				.	.	.																																												.																.	.
Template Conservation									.				.	.	.																																																												.	.
Template Sequence		T	R	I	E	F	H	K	.	H	G	G	.	.	.	P	E	V	L	Q	A	V	E	F	T	P	A	D	P	A	E	N	E	I	Q	V	E	N	K	A	I	G	I	N	F	I	D	T	Y	I	R	S	G	L	Y	P	P	P	S	L	P	S	G	L	G	T	E	A	A	G	I	V	S	K	.	.	V	G	S	G	V
Template Known Secondary structure						B	S	S	.			S	.	.	.	G	G	G													T	T																					T	S	S			S	S	S	S	B				S									.	.			T	T
Template Predicted Secondary structure									.				.	.	.																																																												.	.
Template SS confidence
		3	.	.	.	.	.	.		10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		P	D	Y	Q	S	G	D	W	V	L	G	Y	S	.	.	G	W	Q	D	Y	D	I	S	S	G	D	D	L	V	K	L	G	D	H	P	Q	N	P	S	W	S	L	G	V	L	G	M	P	G	F	T	A	Y	M	G	L	L	D	I	G	Q	P	K	E	G	E	T	L	V	V	A	A	A	T	G	P	V	G	A	T
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		K	H	I	K	A	G	D	R	V	V	Y	A	Q	S	A	L	G	A	Y	S	S	V	H	N	I	I	A	D	K	A	A	I	L	P	A	A	I	S	F	E	Q	A	A	A	S	F	L	K	G	L	T	V	Y	Y	L	L	R	K	T	Y	E	I	K	P	D	E	Q	F	L	F	H	A	A	A	G	G	V	G	L	I
Template Known Secondary structure			S			T	T						S			S	S			S	B	S						G	G	G						T	T	S																					T	T	S				T	T						S	S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Q	I	G	K	L	K	G	C	R	V	V	G	V	A	G	G	A	E	K	C	R	H	A	T	E	V	L	G	F	D	V	C	L	D	H	H	A	D	D	F	A	E	Q	L	A	K	A	C	P	K	G	I	D	I	Y	Y	E	N	V	G	G	K	V	F	D	A	V	L	P	L	L	N	T	S	A	R	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	C	Q	W	A	K	A	L	G	A	K	L	I	G	T	V	G	T	A	Q	K	A	Q	S	A	L	K	A	G	A	W	Q	V	I	N	Y	R	E	E	D	L	V	E	R	L	K	E	I	T	G	G	K	K	V	R	V	V	Y	D	S	V	G	R	D	T	W	E	R	S	L	D	C	L	Q	R	R	G	L	M	V
Template Known Secondary structure										T								S	S											T		S					T	T	T	S										T	T	T										S		G	G	G							T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																										.	.	.																										.	.
Query SS confidence																																										.	.	.																										.	.
Query Sequence		V	C	G	L	V	S	S	Y	N	A	T	E	L	P	P	G	P	D	R	L	P	L	L	M	A	T	V	L	K	K	R	I	R	L	Q	G	F	I	I	A	.	.	.	Q	D	Y	G	H	R	I	H	E	F	Q	R	E	M	G	Q	W	V	K	E	D	K	I	H	Y	.	.	R	E	E	I	T	D	G	L	E	N
Query Conservation																																										.	.	.																										.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																								.	.	.																										.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	G	N	S	S	G	.	.	.	.	.	.	.	.	.	.	A	V	T	G	V	N	L	G	I	L	N	Q	K	G	S	L	Y	V	T	R	P	S	L	Q	G	Y	I	T	T	R	E	E	L	T	E	A	S	N	E	L	F	S	L	I	A	S	G	V	I	K	V	D	V	A	E	Q	Q	K	Y	P	L	K	D
Template Known Secondary structure						T	T		.	.	.	.	.	.	.	.	.	.							T						T	T	S														S																	T	T	S	S						G	G	G				G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.											.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Q	T	F	I	G	L	L	K	G	K	N	F	G	K	V	V	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	R	A	H	E	I	L	E	S	R	A	T	Q	G	S	S	L	L	I
Template Known Secondary structure											T	T				B
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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