Job Description P76113 Confidence 100.00% Date Thu Jan 5 12:19:05 GMT 2012 Rank 58 Aligned Residues 295 % Identity 20% Template c1iz0A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structures of the quinone oxidoreductase from2 thermus thermophilus hb8 and its complex with nadph Resolution 2.30 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	R	W	V	L	A	S	R	P	H	G	A	P	V	P	E	N	F	R	L	E	E	D	D	V	A	T	P	G	E	G	Q	V	L	L	R	T	V	Y	L	S	L	D	P	Y	M	R	G	R	M	S	D	E	P	S	Y	S	P	P	V	D	I	G	G	V	M	V	G	G	T	V	S	R	V	V	E	S	N	H
Query Conservation
Alig confidence										.					.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.					.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	A	W	V	L	K	R	.	L	G	G	P	.	.	.	.	.	L	E	L	V	D	L	P	E	P	E	A	E	E	G	E	V	V	L	R	V	E	A	V	G	L	N	F	A	D	H	L	X	R	L	G	A	Y	L	T	R	L	H	P	P	F	I	P	.	.	.	.	.	.	.	.	.	.	.	G	X	E	V
Template Known Secondary structure									S	.	T	T	S		.	.	.	.	.													T	T																					T		S	S	S				S	S	B			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.					.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.		.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.												60	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	Y	Q	S	G	D	W	V	L	G	Y	S	G	W	Q	D	Y	D	I	S	S	G	D	D	L	V	K	L	G	D	H	P	Q	N	P	S	W	S	L	G	V	L	G	M	P	G	F	T	A	Y	M	G	L	L	D	I	G	Q	P	K	E	G	E	T	L	V	V	A	A	A	T	G	P	V	G	A	T	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	V	V	E	G	R	R	Y	A	A	L	V	P	Q	G	G	L	A	E	R	V	A	V	P	K	G	A	L	L	P	L	P	E	G	L	S	P	E	E	A	A	A	F	P	V	S	F	L	T	A	Y	L	A	L	K	R	A	Q	A	R	P	G	E	K	V	L	V	Q	A	A	A	G	A	L	G	T	A	A	V
Template Known Secondary structure						T	T								S	S			S	B	S						G	G	G						T	T								T	S														T	T			T	T						S	S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	G	K	L	K	G	C	R	V	V	G	V	A	G	G	A	E	K	C	R	H	A	T	E	V	L	G	F	D	V	C	L	D	H	H	A	D	D	F	A	E	Q	L	A	K	A	C	P	K	G	I	D	I	Y	Y	E	N	V	G	G	K	V	F	D	A	V	L	P	L	L	N	T	S	A	R	I	P	V	C
Query Conservation
Alig confidence																																					.	.	.	.	.																			.
Template Conservation																																					.	.	.	.	.																			.
Template Sequence		Q	V	A	R	A	X	G	L	R	V	L	A	A	A	S	R	P	E	K	L	A	L	P	L	A	L	G	A	E	E	A	A	T	Y	A	.	.	.	.	.	E	V	P	E	R	A	K	A	W	G	G	L	D	L	V	L	E	V	.	R	G	K	E	V	E	E	S	L	G	L	L	A	H	G	G	R	L	V	Y	I
Template Known Secondary structure							T	T								S	S	G	G	G	S						T	T		S					G	G	.	.	.	.	.	G								T	T	S								.	S		T	T						T	T
Template Predicted Secondary structure																																					.	.	.	.	.																			.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	V	S	S	Y	N	A	T	E	L	P	P	G	P	D	R	L	P	L	L	M	A	T	V	L	K	K	R	I	R	L	Q	G	F	I	I	A	Q	D	Y	G	H	R	I	H	E	F	Q	R	E	M	G	Q	W	V	K	E	D	K	I	H	Y	R	E	E	I	T	D	G	L	E	N	A	P	Q	T	F	I	G
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		A	P	I	P	P	L	R	L	X	R	R	N	L	A	V	L	G	F	W	L	T	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	E	G	A	L	V	E	E	A	L	G	F	L	L	P	R	L	.	G	R	E	L	R	P	V	V	G	P	V	F	P	F	A	E	A	E	A	A	F	R	A
Template Known Secondary structure						T	T					T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T													G	G	G	B	.	T	T	T	B										G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	K	G	K	N	F	G	K	V	V	I	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	D	R	G	H	T	G	K	V	V	V	R	L
Template Known Secondary structure		T	T		T	T			B
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions