Return to main results Retrieve Phyre Job Id

Job DescriptionQ2EES0
Confidence48.93%DateThu Jan 5 12:33:46 GMT 2012
Rank4Aligned Residues37
% Identity14%Templatec2ca9B_
PDB info PDB header:transcriptional regulationChain: B: PDB Molecule:putative nickel-responsive regulator; PDBTitle: apo-nikr from helicobacter pylori in closed trans-2 conformation
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50
Predicted Secondary structure 








Query SS confidence 




































Query Sequence  NIRFPNQMIEQINIALEQKGSGNFSAWVIEACRRRLC
Query Conservation 




  





   




 





 



 

 
Alig confidence 




































Template Conservation 




  

  

  
   

 



 





  
 
Template Sequence  SVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLV
Template Known Secondary structure 




TTTGGGT
SS
Template Predicted Secondary structure 






Template SS confidence 




































   14.....20.........30.........40.........50
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions