Job Description P0AC94 Confidence 1.96% Date Thu Jan 5 11:17:39 GMT 2012 Rank 15 Aligned Residues 350 % Identity 15% Template d2nwwa1 SCOP info Proton glutamate symport protein Proton glutamate symport protein Proton glutamate symport protein Resolution 3.20

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	I	I	V	V	F	G	A	V	I	G	K	L	M	V	D	S	G	A	A	H	Q	I	A	H	T	L	L	A	R	L	G	L	R	Y	V	Q	L	S	V	I	I	I	G	L	I	F	G	L	A	M	F	Y	E	V	A	F	I	M	L	A	P	L	V	I	V	I	A	A	E	A	K	I	P	F	L	K	L
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		K	I	L	I	G	L	I	L	G	A	I	V	G	L	I	L	G	H	Y	G	Y	A	H	A	V	H	T	Y	V	.	K	P	F	G	D	L	F	V	R	L	L	K	M	L	V	M	P	I	V	F	A	S	L	V	V	G	A	A	S	I	S	P	A	R	L	G	R	V	G	V	K	I	V	V	Y	Y	L	L	T	S
Template Known Secondary structure																			T	T	T	T					T	T	T	T	.																									T	T	T		S		T	T	T	T
Template Predicted Secondary structure																															.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	P	A	V	A	A	A	T	T	A	H	S	L	F	P	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	P	V	A	L	V	N	A	Y	G	A	D	M	G	M	V	Y	I	Y	G	V	L	V	T	I	P	S	V	I	C	A	G	L	I	L	P	K	F	L	G	N	L	E	R
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	A	V	T	L	G	I	I	M	A	R	L	F	N	P	G	A	G	I	H	L	A	V	G	G	Q	Q	F	Q	P	H	Q	A	P	P	L	V	H	I	L	L	D	I	V	P	T	N	P	F	G	A	L	A	N	G	Q	V	L	P	T	I	F	F	A	I	I	L	G	I	A	I	T	Y	L	M	N	S	E	N
Template Known Secondary structure															S		S																										G	G	G	S		S								S																					T	T		S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		P	T	P	S	F	L	K	A	D	Q	P	V	D	M	N	N	L	P	S	F	G	V	S	I	L	V	P	L	I	P	A	I	I	M	I	S	T	T	I	A	N	I	W	L	V	.	.	K	D	T	P	A	W	E	V	V	N	F	I	G	S	S	P	I	A	M	F	I	A	M	V	V	A	F	V	L	F	G	T	A
Query Conservation																																															.	.
Alig confidence																																															.	.
Template Conservation
Template Sequence		E	K	V	R	K	S	A	E	T	L	L	D	A	I	N	G	L	A	E	A	M	Y	K	I	V	N	G	V	M	Q	Y	A	P	I	G	V	F	A	L	I	A	Y	V	M	A	E	Q	G	V	H	V	V	G	E	L	A	K	V	T	A	A	V	Y	V	G	L	T	L	Q	I	L	L	V	Y	F	V	L	L	K	I
Template Known Secondary structure		T	T																											T	T	S																T	G	G	G			T																				T							T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		R	G	H	D	M	Q	W	V	M	N	A	F	E	S	A	V	K	S	I	A	M	V	I	L	I	I	G	A	G	G	V	L	K	Q	T	I	I	D	T	G	I	G	D	T	I	G	M	L	M	S	H	G	.	.	N	I	S	P	Y	I	M	A	W	L	I	T	V	L	I	R	L	A	T	G	Q	G	V	V	S	A
Query Conservation																																																						.	.
Alig confidence																																																						.	.
Template Conservation
Template Sequence		Y	G	I	D	P	I	S	F	I	K	H	A	K	D	A	M	L	T	A	F	V	T	R	S	S	S	G	T	L	P	V	T	M	R	V	A	K	E	M	G	I	S	E	G	I	Y	S	F	T	L	P	L	G	A	T	I	N	M	D	G	T	A	L	Y	Q	G	V	C	T	F	F	I	A	N	A	L	G	S	H	L
Template Known Secondary structure		T	T																							T	G	G	G										T	T	T			T	T	T					T	T	T	T	S	S	S																					T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	A	A	G	I	I	S	A	A	I	L	D	P	A	T	G	Q	L	V	G	V	N	P	A	L	L	V	L	A	T	A	A	G	S	N	T	L	T	H	I	N	D	A	S	F	W	L	F	K	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	G	Q	Q	L	T	I	V	L	T	A	V	L	A	S	I	G	T	A	G	V	P	G	A	G	A	I	M	L	A	M	V	L	H	S	V	G	L	P	L	T	D	P	N	V	A	A	A	Y	A	M
Template Known Secondary structure			S	S	T	T													T	T	S	S		T	T														T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions