Job Description P28635 Confidence 92.48% Date Thu Jan 5 11:45:06 GMT 2012 Rank 172 Aligned Residues 112 % Identity 13% Template d2hava1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		N	H	I	K	V	G	V	I	V	G	A	E	Q	Q	V	A	E	V	A	Q	K	V	A	K	D	K	Y	G	L	D	V	E	L	V	T	F	N	D	Y	V	L	P	N	E	A	L	S	K	G	D	I	D	A	N	A	F	Q	H	K	P	Y	L	D	Q	Q	L	K	D	R	G	Y	K	L	V	A	V	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																									.	.	.	.																																							.												.	.	.
Template Conservation																									.	.	.	.																																							.
Template Sequence		K	P	V	K	W	C	A	L	S	H	H	E	R	L	K	C	D	E	W	S	V	N	S	.	.	.	.	V	G	K	I	E	C	V	S	A	E	T	T	E	D	C	I	A	K	I	M	N	G	E	A	D	A	M	S	L	D	G	G	F	V	Y	I	A	G	.	K	C	G	L	V	P	V	L	A	E	N	Y	N	K
Template Known Secondary structure										S															.	.	.	.	T	T	S							S	S											T	S																.		T	T										S	S
Template Predicted Secondary structure																									.	.	.	.																																							.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.
												108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	N	T	F	V	Y	P	I	A	G	Y	S	K	K	I	K	S	L	D	E	L	Q	D	G	S	Q	V	A	V	P	N	D	P	T	N	L	G	R	S	L	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																	.
Template Sequence		S	D	N	C	E	D	T	P	E	A	G	Y	F	A	V	A	V	V	K	K	S	A	S	D	L	T	W	D	N	L	K	.	G	K	K	S	C	H	T	A	V	G	R	T	A	G	W	N	I	P	M
Template Known Secondary structure		T	T	S	G	G	G														T	T	S	S	S			G	G	G		T	.	T						S		T	T		T	T	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions