Job Description P28635 Confidence 98.59% Date Thu Jan 5 11:45:06 GMT 2012 Rank 54 Aligned Residues 230 % Identity 10% Template d1q35a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																.																									.	.	.	.	.	.	.	.	.
Query Sequence		P	N	H	I	K	V	G	V	I	V	G	A	E	Q	Q	V	A	E	V	A	Q	K	V	A	K	D	K	Y	G	L	D	V	E	L	V	T	F	N	D	Y	V	L	P	N	E	A	.	L	S	K	G	D	I	D	A	N	A	F	Q	H	K	P	Y	L	D	Q	Q	L	K	D	R	.	.	.	.	.	.	.	.	.
Query Conservation																																																.																									.	.	.	.	.	.	.	.	.
Alig confidence								.	.																																							.																									.	.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		A	N	E	V	N	V	.	.	Y	S	Y	R	Q	P	Y	L	I	E	P	M	L	K	N	F	E	K	D	T	G	I	K	V	N	I	I	F	A	D	G	L	V	D	R	V	K	Q	E	G	E	L	S	P	A	D	V	L	L	T	V	D	I	S	R	V	M	E	I	V	N	A	D	L	A	Q	K	I	D	S	K	V
Template Known Secondary structure								.	.			S	S		G	G	G	T																															G	G	G									S											T	T		B
Template Predicted Secondary structure								.	.
Template SS confidence
		1	.	.	.	.	.			.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
																			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	K	L	V	A	V	G	N	T	F	V	Y	P	I	A	G	Y	S	K	K	I	K	S	L	D	E	L	Q	D	.	.	.	.	G	S	Q	V	A	V	P	N	D	P	T	N	L	G	R	S	L	L	L	L	Q	K	V	G	L	I	K	L	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.																									.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		L	E	K	N	I	P	A	Q	F	R	D	S	N	D	Q	W	F	G	L	T	T	R	A	R	V	I	Y	T	S	K	D	R	V	G	K	L	P	A	G	F	D	Y	L	D	L	A	K	P	E	Y	K	G	K	V	C	V	R	S	G	K	N	S	Y	N	V	S	L	F	A	A	M	I	E	H	Y	.	.	.	.	.
Template Known Secondary structure						S		G	G	G	B		T	T	S	S															T	T	T	T		S			T	T			G	G	G	G	G	S	G	G	G	T	T					S		T	T	S															.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																											.	.	.	.	.	.	.																.
Query SS confidence																																																											.	.	.	.	.	.	.																.
Query Sequence		D	G	V	G	L	L	P	T	V	L	D	V	V	E	N	P	K	N	L	K	I	V	E	L	E	A	P	Q	L	P	R	S	L	D	D	A	Q	I	A	L	A	V	I	N	T	T	Y	A	S	Q	I	G	L	T	P	A	K	.	.	.	.	.	.	.	D	G	I	F	V	E	D	K	E	S	P	Y	V	N	L	.
Query Conservation																																																											.	.	.	.	.	.	.																.
Alig confidence		.	.																																																								.	.	.	.	.	.	.																.
Template Conservation		.	.
Template Sequence		.	.	G	I	E	K	T	K	A	F	L	E	G	L	K	A	N	L	A	R	K	P	Q	G	G	D	R	D	Q	V	K	A	I	K	E	G	I	C	D	Y	S	I	G	N	S	Y	Y	Y	G	K	M	L	D	D	E	K	Q	K	S	W	A	E	A	A	I	I	N	F	P	S	G	E	H	G	T	H	K	N	I	S
Template Known Secondary structure		.	.															T	B	S	S				S												T	S		S						T									S	T	T	T						T								S	T	T		B
Template Predicted Secondary structure		.	.
Template SS confidence
				155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
			231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	V	T	R	E	D	N	K	D	A	E	N	V	K	K	F	V	Q	A	Y	Q	S	D	E	V	Y	E	A	A	N	K	V	F	N	G	G	A	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	V	V	I	A	K	H	S	P	N	K	A	N	A	V	K	L	I	E	Y	L	S	G	E	K	A	Q	G	L	Y	A	E	L	N	H	E	Y	P	V
Template Known Secondary structure						B	T	T		T	T													S																S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions