Job Description P28635 Confidence 84.39% Date Thu Jan 5 11:45:06 GMT 2012 Rank 191 Aligned Residues 126 % Identity 12% Template d1dota1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.35

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		P	N	H	I	K	V	G	V	I	V	G	A	E	Q	Q	V	A	E	V	A	Q	K	V	A	K	D	K	Y	G	L	D	V	E	L	V	T	F	N	D	Y	V	L	P	N	E	A	L	S	K	G	D	I	D	A	N	A	F	Q	H	K	P	Y	L	D	Q	Q	L	K	D	R	G	Y	K	L	V	A	V	G	N	.
Query Conservation																																																																																	.
Alig confidence																														.																																																			.
Template Conservation																														.
Template Sequence		K	T	T	V	R	W	C	T	I	S	S	A	E	E	K	K	C	N	S	L	K	D	H	M	Q	Q	E	R	.	V	T	L	S	C	V	Q	K	A	T	Y	L	D	C	I	K	A	I	S	N	N	E	A	D	A	I	S	L	D	G	G	Q	V	F	E	A	G	L	A	P	Y	K	L	K	P	I	A	A	E	V	Y
Template Known Secondary structure										S	S	T	T									T	T	T	T	T	T	S	S	.	S								S	S										T	T	T			B												T	S	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
										109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																									.
Query SS confidence		.	.	.	.	.	.	.	.																									.
Query Sequence		.	.	.	.	.	.	.	.	T	F	V	Y	P	I	A	G	Y	S	K	K	I	K	S	L	D	E	L	Q	D	G	S	Q	.	V	A	V	P	N	D	P	T	N	L	G	R	S	L	L	L	L	Q	K	V	G	L	I	K
Query Conservation		.	.	.	.	.	.	.	.																									.
Alig confidence		.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		E	R	S	G	G	S	T	T	S	Y	Y	A	V	A	V	V	K	K	G	T	D	F	M	I	K	D	L	R	G	K	T	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	T	L	I	H	R	E	D	I	E
Template Known Secondary structure			S	S	S				S										T	T					G	G	G		T	T						S		S	S		T	T	T	T											S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions