Job Description P28635 Confidence 31.00% Date Thu Jan 5 11:45:06 GMT 2012 Rank 215 Aligned Residues 96 % Identity 13% Template d1cb6a2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																				.	.	.	110	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	K	D	K	Y	G	L	D	V	E	L	V	T	F	N	D	Y	V	L	P	N	E	A	L	S	K	G	D	I	D	A	N	A	F	Q	H	K	P	Y	L	D	Q	Q	L	K	D	R	G	Y	K	L	V	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	T	F	V
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.
Template Sequence		N	Q	W	S	G	L	S	E	G	S	V	T	C	S	S	A	S	T	T	E	D	C	I	A	L	V	L	K	G	E	A	D	A	M	S	L	D	G	G	Y	V	Y	T	A	G	K	.	C	G	L	V	P	V	L	A	E	N	Y	K	S	Q	Q	S	S	D	P	D	P	N	C	V	D	R	P	V	E	G	Y	L	A
Template Known Secondary structure								T	T	T	S							S	S											T	S			B														.	T	T											S	S	S	S					T	T	G	G	G	S
Template Predicted Secondary structure																																																.
Template SS confidence
		1359	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.		.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	I	A	G	Y	S	K	K	I	K	S	L	D	E	L	Q	D	G	S	Q	V	A	V	P	N	D	P	T	N	L	G	R	S	L	L	L
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		V	A	V	V	R	R	S	D	T	S	L	T	W	N	S	V	K	.	G	K	K	S	C	H	T	A	V	D	R	T	A	G	W	N	I	P	M
Template Known Secondary structure							S	S		T	T			G	G	G		T	.	T	S					S		T	T		T	T	T	T
Template Predicted Secondary structure																			.
Template SS confidence
		1438	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.		.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions