Job Description P28635 Confidence 97.76% Date Thu Jan 5 11:45:06 GMT 2012 Rank 108 Aligned Residues 120 % Identity 17% Template d1b1xa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.62

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	P	N	H	I	K	V	G	V	I	V	G	A	E	Q	Q	V	A	E	V	A	Q	K	V	A	K	D	K	Y	G	L	D	V	E	L	V	T	F	N	D	Y	V	L	P	N	E	A	L	S	K	G	D	I	D	A	N	A	F	Q	H	K	P	Y	L	D	Q	Q	L	K	D	R	G	Y	K	L	V	A	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	R	K	S	V	R	W	C	T	I	S	P	A	E	A	A	K	C	A	K	F	Q	R	N	M	K	K	V	R	G	P	S	V	S	C	I	R	K	T	S	S	F	E	C	I	Q	A	I	A	A	N	K	A	D	A	V	T	L	D	G	G	L	V	Y	E	A	G	L	H	P	Y	K	L	R	P	V	A	A	E
Template Known Secondary structure												S	S																	T	T										S	S										T	T	S			B													S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		108	.										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.
Query Sequence		N	T	.	.	.	.	.	.	.	.	.	F	V	Y	P	I	A	G	Y	S	K	K	I	K	S	L	D	E	L	Q	D	G	S	Q	V	A	V	P	N	D	P	T	N	L	G	R	S	L	L	L
Query Conservation				.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																				.
Template Conservation																																.
Template Sequence		V	Y	Q	T	R	G	K	P	Q	T	R	Y	Y	A	V	A	V	V	K	K	G	S	G	F	Q	L	N	Q	L	Q	.	G	V	K	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I
Template Known Secondary structure			B			S	S	S		B	S										T	T					G	G	G		T	.	T						S		T	T		T	T	T	T
Template Predicted Secondary structure																																.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions