Return to main results Retrieve Phyre Job Id

Job DescriptionP28635
Confidence20.25%DateThu Jan 5 11:45:06 GMT 2012
Rank224Aligned Residues74
% Identity11%Templatec3i3vC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:probable secreted solute-binding lipoprotein; PDBTitle: crystal structure of probable secreted solute-binding2 lipoprotein from streptomyces coelicolor
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.... .....50.........60........ .70.........80. ........90.........100
Predicted Secondary structure 







....







..



.





Query SS confidence 
















. . . .























. .












.


















Query Sequence  KDPNHIKVGVIVGAEQQ. . . . VAEVAQKVAKDKYGLDVELVTFND. . YVLPNEALSKGDI. DANAFQHKPYLDQQLKDRG
Query Conservation       
 

        ....                
       ..      
   
  .
                  
Alig confidence 
















....























..












.


















Template Conservation    
 
                    
  
    
 
 
       
    
     

  


               
 
Template Sequence  SDPDTLVVHTQLGTTAPGSPTYLAAVDRFREENPGVKIKNLVNGDDLAQVYETSRLARKEADVVXVNLYDKTLAWTDVGA
Template Known Secondary structure 
STTS
SSSSTT
TT

STTTT


S

STTGGGTS
Template Predicted Secondary structure 






























Template SS confidence 















































































   37..40.........50.........60.........70.........80.........90.........100.........110......
 
   101
Predicted Secondary structure 
Query SS confidence 
Query Sequence  Y
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  T
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   117
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions