Job Description P28635 Confidence 88.32% Date Thu Jan 5 11:45:06 GMT 2012 Rank 183 Aligned Residues 197 % Identity 16% Template c3eq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:porphobilinogen deaminase; PDBTitle: the crystal structure of human porphobilinogen deaminase at2 2.8a resolution Resolution 2.80 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	I	K	V	G	V	I	V	G	A	E	Q	Q	V	A	E	V	A	Q	K	V	A	K	D	K	Y	G	L	D	V	E	L	V	T	F	N	D	Y	V	L	P	N	E	A	L	S	K	G	D	I	D	A	N	A	F	Q	H	K	P	Y	L	D	Q	Q	L	K	D	R	G	Y	K	L	V	A	V	G	N	T	F
Query Conservation
Alig confidence																																																																		.	.
Template Conservation																																																																		.	.
Template Sequence		R	V	I	R	V	G	T	R	K	S	Q	L	A	R	I	Q	T	D	S	V	V	A	T	L	K	A	S	Y	P	G	L	Q	F	E	I	I	A	F	T	K	E	L	E	H	A	L	E	K	N	E	V	D	L	V	V	H	S	L	K	D	L	P	T	V	.	.	L	P	P	G	F	T	I	G	A	I	C	K	R	E
Template Known Secondary structure										S	S																		S	T	T																		T	T	S		S						G	G	G	S		S	S	.	.			T	T
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		V	Y	P	I	A	G	Y	S	K	.	.	.	K	I	K	S	L	D	E	L	Q	D	G	S	Q	V	A	V	P	N	D	P	T	N	L	G	R	S	L	L	L	L	Q	K	V	G	L	I	K	L	K	D	G	V	G	L	L	P	T	V	L	D	V	V	E	N	P	K	N	L	K	I	V	E	L	E	A	P	Q	L
Query Conservation											.	.	.
Alig confidence											.	.	.																.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	H	D	A	V	V	F	H	P	K	F	V	G	K	T	L	E	T	L	P	E	K	S	V	V	G	.	.	.	.	T	S	S	L	R	R	A	A	Q	L	Q	R	K	F	P	H	L	E	F	R	S	I	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	N	T	R
Template Known Secondary structure											G	G	G	T	T			G	G	G	S		T	T					.	.	.	.															T	T	S							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																					.	170	.	.	.
		188	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure						.																																						.	.	.	.
Query SS confidence						.																																						.	.	.	.
Query Sequence		P	R	S	L	.	D	D	A	Q	I	A	L	A	V	I	N	T	T	Y	A	S	Q	I	G	L	T	P	A	K	D	G	I	F	V	E	D	K	E	S	P	Y	V	.	.	.	.	N	L	I	V	T	R	E	D	N	K	D	A	E	N	V	K	K	F	V	Q	A	Y	Q	S	D	E	V	Y
Query Conservation						.																																						.	.	.	.
Alig confidence						.																																						.	.	.	.										.	.	.
Template Conservation																																																									.	.	.
Template Sequence		L	R	K	L	D	E	Q	Q	E	F	S	A	I	I	L	A	T	A	G	L	Q	R	M	G	W	H	N	R	V	G	Q	I	L	H	P	E	E	C	M	Y	A	V	G	Q	G	A	L	G	V	E	V	R	A	K	D	.	.	.	Q	D	I	L	D	L	V	G	V	L	H	D	P	E	T	L
Template Known Secondary structure							T	S	S	S		S													T		G	G	G							T	T	T			B		T	T	T	T								T	T		.	.	.								G	G	G
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions