Job Description P28635 Confidence 63.06% Date Thu Jan 5 11:45:06 GMT 2012 Rank 203 Aligned Residues 79 % Identity 9% Template c2z8fB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:galacto-n-biose/lacto-n-biose i transporter substrate- PDBTitle: the galacto-n-biose-/lacto-n-biose i-binding protein (gl-bp) of the2 abc transporter from bifidobacterium longum in complex with lacto-n-3 tetraose Resolution 1.65 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																.	.																				.													.	.	.	.	.													.
Query SS confidence																.	.																				.													.	.	.	.	.													.
Query Sequence		Q	D	E	K	D	P	N	H	I	K	V	G	V	I	.	.	V	G	A	E	Q	Q	V	A	E	V	A	Q	K	V	A	K	D	K	Y	.	G	L	D	V	E	L	V	T	F	N	D	Y	.	.	.	.	.	V	L	P	N	E	A	L	S	K	G	D	I	.	D	A	N	A	F	Q	H	K	P	Y	L	D	Q	Q
Query Conservation																.	.																				.													.	.	.	.	.													.
Alig confidence																.	.																				.													.	.	.	.	.													.
Template Conservation
Template Sequence		T	D	D	G	G	V	V	N	I	T	Y	M	H	R	L	P	D	S	E	G	M	T	L	V	N	D	I	V	A	K	W	N	K	Q	H	P	D	I	Q	V	K	A	T	K	F	D	G	K	A	S	D	M	I	K	K	L	E	T	D	V	K	S	G	E	A	P	D	L	A	Q	V	G	Y	A	E	L	P	E	V	F
Template Known Secondary structure						S														T	T	S															T	T									S	S		G	G	G												T				S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		96	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	D	R	G	Y	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	G	L	L	Q	D	V
Template Known Secondary structure			T	T		B
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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