Job Description P28635 Confidence 76.54% Date Thu Jan 5 11:45:06 GMT 2012 Rank 199 Aligned Residues 87 % Identity 9% Template c2w7yA_ PDB info PDB header:sugar-binding protein Chain: A: PDB Molecule:probable sugar abc transporter, sugar-binding PDBTitle: structure of a streptococcus pneumoniae solute-binding2 protein in complex with the blood group a-trisaccharide. Resolution 2.35 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		L	E	A	P	Q	L	P	R	S	L	D	D	A	Q	I	A	L	A	V	I	N	T	T	Y	A	S	Q	I	G	L	T	P	A	K	D	G	I	F	V	E	D	K	E	S	P	Y	V	.	.	.	.	N	L	I	V	T	R	E	D	N	K	D	A	E	N	V	K	K	F	V	Q	A	Y	Q	S	D	E	V	Y	E
Query Conservation																																																	.	.	.	.
Alig confidence																																																	.	.	.	.
Template Conservation
Template Sequence		G	D	A	N	A	Y	S	K	D	F	Q	E	G	K	S	A	V	F	F	N	G	V	W	A	S	G	E	X	S	K	N	P	S	L	A	P	G	I	Y	P	A	G	V	A	I	S	S	S	G	G	G	I	T	I	S	S	K	X	S	E	A	K	Q	K	L	A	L	E	F	L	K	Y	X	T	S	D	D	V	Q	K
Template Known Secondary structure		B											T	T	S								G	G	G					T	T	S	T	T						B	G	G	G													B	S	S	S																T	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	N	K	V	F	N	G	G	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	F	E	K	V	G	A	N	P	S
Template Known Secondary structure						T	S		S		B	S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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