Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADL1
Confidence100.00%DateThu Jan 5 11:21:16 GMT 2012
Rank3Aligned Residues378
% Identity8%Templated1pv7a_
SCOP infoMFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40..... ....50.........60.........70.........80.........90......
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Query Sequence  NWSAVFSVAFCVACLIIVEFLPVSLLTP. MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLT
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Template Sequence  KNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGML
Template Known Secondary structure  S


TTT
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   97..100.........110.........120.........130.........140.........150.........160.........170......
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Query Sequence  LSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNV
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Template Sequence  VMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI
Template Known Secondary structure  TTTT
TTTTGGGGGTTS

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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   177..180.........190.........200.........210.........220 .........230.......
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Query Sequence  FNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMA. . . . . . . . . . . . . . . . . . . GMIAIFMSFAGQFAFFT
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Template Sequence  NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFA
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  YIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGL
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Template Sequence  NFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMF
Template Known Secondary structure  TTSSS
TT
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   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   318.320.........330....... ..340.........350 .........360.........370.........380.........390.....
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Query Sequence  TFALVPVGWSTWITRSLADQ. AEKAGSIQVAVIQ. LANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVKMKK
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Template Sequence  EVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPG
Template Known Secondary structure  S
GGGTTT
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   325....330.........340.........350.........360.........370.........380.........390.........400....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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