Job Description P0ADL1 Confidence 1.65% Date Thu Jan 5 11:21:16 GMT 2012 Rank 44 Aligned Residues 82 % Identity 15% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	F	I	A	E	N	R	G	A	D	A	I	T	R	P	N	W	S	A	V	F	S	V	A	F	C	V	A	C	L	I	I	V	E	F	L	P	V	S	L	L	T	P	M	A	Q	D	L	G	I	S	E	G	V	A	G	Q	S	V	T	V	T	A	F	V	A	M	F	A	S	L	F	I	T	Q	T	I	Q	A
Query Conservation
Alig confidence																																																				.	.
Template Conservation																																																				.	.
Template Sequence		K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T	S	L	A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	.	.	T	G	V	M	G	G	M	V	T	A	T	V	L	A	I	F	F	V	P	V	F	F	V	V	V	R	R	R
Template Known Secondary structure		S	S				T	T									T	T																				T	T		S	S	S									.	.												T	T	T	T	S	S	S	S	S	S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		955	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.			.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.
		82	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	R	K
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		1033	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions