Return to main results Retrieve Phyre Job Id

Job DescriptionP37664
Confidence99.41%DateThu Jan 5 11:56:37 GMT 2012
Rank117Aligned Residues144
% Identity13%Templatec3igrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal-protein-s5-alanine n-acetyltransferase; PDBTitle: the crystal structure of ribosomal-protein-s5-alanine2 acetyltransferase from vibrio fischeri to 2.0a
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20. ........30.........40.........50..... ....60......
Predicted Secondary structure 




........









...





....
Query SS confidence 



















. . . . . . . .

































. . .










. . . .
Query Sequence  IREAQRSELPAILELWLEST. . . . . . . . TWGHPFIKANYWRDCIPLVRDAYLANAQNWVWEE. . . DGKLLGFVSIM. . . .
Query Conservation 

     
   
  
     ........                              
   ... 
   
     ....
Alig confidence 



















........

































...










....
Template Conservation 

     
   
                                                          
         
Template Sequence  VRLIKSSDAVTIANYFXRNRHHLAPWEPKRSHAFFTPEGWKQRLLQLVELHKHNLAFYFVVVDKNEHKIIGTVSYSNITR
Template Known Secondary structure 

GGGTTTTS



GGGGSTTS
TTTT
Template Predicted Secondary structure 



























Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   67..70.........80.........90..... ....100.........110.........120.... .....130......
Predicted Secondary structure  ..



......









..




Query SS confidence  . .




























. . . . . .




























. .











Query Sequence  . . EGRFLAAMFVAPKAVRRGIGKALMQYVQQ. . . . . . RHPHLMLEVYQKNQPAINFYQAQGFHIVD. . CAWQDETQLPTW
Query Conservation  ..       
 
 
  

 


  

     ......            
  
  

 
 

    ..       
    
Alig confidence  ..




























......




























..











Template Conservation        


  
     
 
             
       
   
   
  
     
 

  

  
      
   
Template Sequence  FPFHAGHVGYSLDSEYQGKGIXRRAVNVTIDWXFKAQNLHRIXAAYIPRNEKSAKVLAALGFVKEGEAKKYLYINGAWED
Template Known Secondary structure  TTT

GGGTTSSTS

S
TT
TT
TT
Template Predicted Secondary structure 
























Template SS confidence 















































































   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   137..140.....
Predicted Secondary structure 



Query SS confidence 








Query Sequence  IMSWPVVQT
Query Conservation   
  

   
Alig confidence 








Template Conservation       

  
Template Sequence  HILTSKIND
Template Known Secondary structure 
T
Template Predicted Secondary structure 
Template SS confidence 








   172.......180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions