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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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| . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
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Query Sequence |   |
I | R | E | A | Q | R | S | E | L | P | A | I | L | E | L | W | L | E | S | T | T | W | G | H | P | F | I | K | A | N | Y | W | R | D | C | I | P | L | V | R | D | A | Y | L | A | N | A | Q | N | W | V | W | E | E | D | G | K | L | L | G | F | V | S | I | M | E | G | R | . |
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Query Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
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|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
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|   |   |   | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
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Template Sequence |   |
V | A | R | I | A | P | N | E | R | D | A | A | R | R | I | V | R | T | T | Y | E | A | Q | . |
G | Y | A | I | D | E | S | F | A | T | F | L | E | G | . |
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P | S | A | T | T | F | G | L | F | N | G | E | V | L | Y | G | T | I | S | I | I | N | D | G | A | Q | G | L | P | M | D | S | I | Y | A | V |
Template Known Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T |
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| T |  |  |  |  |  |  |  | S | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  | S | S | S |
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| G | G | G | G | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
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. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
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70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
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. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
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. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
. | . | . | . | 130 |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
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F | L | A | A | M | F | V | A | P | K | A | V | R | R | G | . |
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I | G | K | A | L | M | Q | Y | V | Q | Q | R | H | P | H | L | M | L | E | . |
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V | Y | Q | K | N | Q | P | A | I | N | F | Y | Q | A | Q | G | F | H | I | V | D | C | . |
A | W | Q | D | E |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
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|   |   |   |   |   | . |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |
|   |   |   |   |   |   |
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|   |   |   |   |   |   |
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|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
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|   |   |   |
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|   |
|   |
|   |   |
Template Sequence |   |
E | L | A | A | W | R | G | E | G | K | K | L | A | E | V | V | Q | F | A | M | D | E | A | V | A | G | K | P | S | P | F | E | A | A | S | L | F | T | M | V | L | T | Y | A | L | E | T | H | I | D | Y | L | C | I | S | I | N | P | K | H | D | T | F | Y | S | L | L | G | F | T | Q | I | G | A | L | K | H | Y | G | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
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|  |  |  |  |  |  |  |  |  |
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| S |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
  |
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
T | Q | L | P | T | W | I | M | S | W | P | V |
Query Conservation |   |
  |
|   |   |   |   |   |
|   |   |
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Alig confidence |   |
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Template Conservation |   |
|   |   |
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|   |   |   |   |   |   |
Template Sequence |   |
V | N | A | P | A | I | A | R | A | L | Y | V |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  | G |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . |
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