Job Description P24218 Confidence 99.90% Date Thu Jan 5 11:41:20 GMT 2012 Rank 8 Aligned Residues 158 % Identity 30% Template d1aiha_ SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		N	K	R	V	R	W	L	E	K	E	E	A	K	R	L	I	D	E	C	P	E	.	.	.	.	P	L	K	S	V	V	K	F	A	L	A	T	G	L	R	K	S	N	I	I	N	L	E	W	Q	Q	I	D	M	Q	R	R	V	A	W	V	N	P	E	E	S	K	S	N	R	A	I	G	V	A	L	N	D	T	A
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.																																				.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		E	T	E	L	A	F	L	Y	E	R	D	I	Y	R	L	L	A	E	C	D	N	S	R	N	P	D	L	G	L	I	V	R	I	C	L	A	T	G	A	R	W	S	E	A	E	T	L	T	Q	S	Q	V	M	P	Y	K	I	T	F	T	.	.	.	.	N	T	K	S	K	K	N	R	T	V	P	I	S	D	E	L
Template Known Secondary structure																					T	T	S	S	S	T	T																				T		B	T	T	T			T	T						.	.	.	.	S	S	S	S	S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	V	L	R	D	Q	I	G	K	H	H	K	W	V	F	V	H	T	K	A	A	K	R	A	D	G	T	S	T	P	A	V	R	K	M	R	I	D	S	K	T	S	W	L	S	A	C	R	R	A	G	I	E	D	F	R	F	H	D	L	R	H	T	W	A	S	W	L	I	Q	S	G	V	P	L	S	V	L	Q
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	M	L	P	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	R	L	F	N	D	A	Y	E	S	F	E	N	A	V	L	R	A	E	I	E	L	P	K	G	Q	L	T	H	V	L	R	H	T	F	A	S	H	F	M	M	N	G	G	N	I	L	V	L	K
Template Known Secondary structure					S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B	S	S														T	T					T	T		T	T	T													T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250																							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	G	G	W	E	S	I	E	M	V	R	R	Y	A	H	L	A	P	N	H	L	T	E	H	A	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	L	G	H	S	T	I	E	M	T	M	R	Y	A	H	F	A	P	S	H	L	E	S	A	V	K	F
Template Known Secondary structure					T		S	S					G	G	G	G	G	G	S				T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions