Job Description P24218 Confidence 16.64% Date Thu Jan 5 11:41:20 GMT 2012 Rank 49 Aligned Residues 112 % Identity 13% Template d1a41a_ SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Eukaryotic DNA topoisomerase I, catalytic core Resolution 2.30

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		I	I	N	L	E	W	Q	Q	I	D	M	Q	R	R	V	A	W	V	N	P	E	E	S	K	S	N	R	A	I	G	V	A	.	L	N	D	T	A	C	K	V	L	R	D	Q	I	G	K	H	H	K	W	V	F	V	H	T	K	A	A	K	R	A	D	G	T	S	T	P	A	V	R	K	M	R	I	D	S	K	T
Query Conservation																																		.
Alig confidence																																		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	T	L	K	N	K	H	I	E	I	S	P	D	E	I	V	I	K	F	V	G	K	D	K	V	S	H	E	F	V	V	H	K	S	N	R	L	Y	K	P	L	L	K	L	T	D	D	S	S	P	E	E	F	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	L	S	E	R	K	V	Y	E
Template Known Secondary structure				T		B	G	G	G					T	T									T	T	T									T	T	S	S	S										T	T		T	T	S	B	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200															.	.	.	.	.	.	.	.	.	210
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.																				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	W	L	S	A	C	R	R	A	G	I	E	D	F	R	F	H	D	L	R	H	T	W	A	S	W	L	I	Q	S	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	S	V	L	Q	E	M	G	G	W	E	S	I	E	M	V	R	R	Y	A	H
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		C	I	K	.	.	.	.	.	.	.	Q	F	G	I	R	I	K	D	L	R	T	Y	G	V	N	Y	T	F	L	Y	N	F	W	T	N	V	K	S	I	S	P	L	P	S	P	K	K	L	I	A	L	T	I	K	Q	T	A	E	V	V	G	H	T	P	S	I	S	K	R	A	Y	M	A
Template Known Secondary structure					.	.	.	.	.	.	.		T	T																										S	S	S																				S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		211	.	.								.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions