Return to main results Retrieve Phyre Job Id

Job DescriptionP24218
Confidence97.11%DateThu Jan 5 11:41:20 GMT 2012
Rank27Aligned Residues151
% Identity11%Templatec2v6eB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protelemorase; PDBTitle: protelomerase telk complexed with substrate dna
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   196...200.........210.........220.........230.........240... ......250.........260.........270..
Predicted Secondary structure 

























...















Query SS confidence 















































. . .




























Query Sequence  DECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKS. . . NRAIGVALNDTACKVLRDQIGKHHKWVFV
Query Conservation              
      
                            ...      
        
             
Alig confidence 















































...




























Template Conservation 
   
   

 








 








   
   
 








      





 

 


 


 

      
Template Sequence  TTRRGMAPLAFALAALSGRRMIEIMLQGEFSVAGKYTVTFLGQAKKRSEDKGISRKIYTLCDATLFVSLVNELRSCPAAA
Template Known Secondary structure  SSTGGG


TT

SSS

TT



S



SS
TTSGGGT
Template Predicted Secondary structure 




























Template SS confidence 















































































   256...260.........270.........280.........290.........300.........310.........320.........330.....
 
   273......280.........290. ........300.........310.........320...... ...330.. ....
Predicted Secondary structure 


















......










.........



.
Query SS confidence 


















. . . . . .


































. . . . . . . . .





.



Query Sequence  HTKAAKRADGTSTPAVRKM. . . . . . RIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQ. . . . . . . . . SGVPLS. VLQE
Query Conservation                     ......               

   
 
 



 

 
  ......... 

   . 
  
Alig confidence 


















......











...



















.........





.



Template Conservation   
 
    
        
  


 

  

   
  
...      













 
   


 
    
 
 
 
Template Sequence  DFDEVIKGYGENDTRSENGRINAILATAFNPWVKTFL. . . GDDRRVYKDSRAIYARIAYEMFFRVDPRWKNVDEDVFFME
Template Known Secondary structure  TTT
SSTT



...SSSS

TTTTTSGGGTTS
Template Predicted Secondary structure 











...


















Template SS confidence 















































































   336...340.........350.........360.........370.. .......380.........390.........400.........410..
 
   337..340.........
Predicted Secondary structure 



Query SS confidence 












Query Sequence  MGGWESIEMVRRY
Query Conservation   



    
  
Alig confidence 












Template Conservation 



 




 

Template Sequence  ILGHDDENTQLHY
Template Known Secondary structure  T
SSTTGGGSS
Template Predicted Secondary structure 



Template SS confidence 












   413......420.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions