Job Description P24218 Confidence 98.82% Date Thu Jan 5 11:41:20 GMT 2012 Rank 22 Aligned Residues 107 % Identity 11% Template c2kj5A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phage integrase; PDBTitle: solution nmr structure of a domain from a putative phage2 integrase protein nmul_a0064 from nitrosospira multiformis,3 northeast structural genomics consortium target nmr46c Resolution UNK

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		L	G	D	L	P	D	V	T	F	E	E	A	C	L	R	W	L	E	E	K	A	.	.	.	D	K	K	S	L	D	S	D	K	S	R	I	E	F	W	L	E	H	F	E	G	I	R	L	K	D	I	S	E	A	K	I	Y	S	A	V	S	R	M	H	N	R	K	T	K	E	I	W	K	Q	K	V	Q	A	A	I
Query Conservation																							.	.	.
Alig confidence																							.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	E	K	N	A	Y	T	V	A	Q	L	A	D	E	Y	F	E	R	M	I	A	G	R	W	K	H	P	N	I	V	R	S	R	I	E	K	D	I	K	P	A	I	G	S	L	K	V	E	D	V	K	P	R	H	I	D	D	V	L	K	A	V	M	K	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S	S			B													T	T	T	S		S												T	T	S		S	G	G	G	S	B	S	S	S																	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	G	K	E	L	P	V	Y	E	P	K	P	V	S	T	Q	T	K	A	K	H	L	A	M	I	K	A	I	L	R	A	A	E	R	D	W	K	W	L	E	K	A	P	V	I	K	I	P	A	V	R	N	K	R	V	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	S	I	A	N	D	T	L	R	W	L	K	R	M	F	N	Y	A	I	K	R	H	I	I	E	Y	N	P	A	A	A	F	D	P	G	D	A	G	G	K	L	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						T	T	S		S	S		G	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions