Job Description P24218 Confidence 7.57% Date Thu Jan 5 11:41:20 GMT 2012 Rank 63 Aligned Residues 106 % Identity 13% Template c2b9sA_ PDB info PDB header:isomerase/dna Chain: A: PDB Molecule:topoisomerase i-like protein; PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex Resolution 2.27 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.												.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		L	K	S	V	V	K	F	A	L	A	T	G	L	R	K	S	.	.	.	.	.	.	.	.	.	.	.	N	I	I	N	L	E	W	Q	Q	I	D	M	Q	R	R	V	A	W	V	N	P	E	E	S	K	S	N	R	.	.	A	I	G	V	A	L	N	D	T	A	C	K	V	L	R	D	Q	I	G	K	H	H	K
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		R	A	V	A	M	Y	F	I	D	R	L	A	L	R	V	G	N	E	K	G	E	D	E	A	D	T	V	G	C	C	S	L	R	V	E	H	I	Q	L	M	P	D	N	I	V	R	F	D	F	L	G	K	D	S	I	R	Y	Q	N	D	V	A	V	L	P	E	V	Y	A	L	L	Q	R	F	T	R	R	K	S	P
Template Known Secondary structure																						T	T	S						G	G	G		B	G	G	G					T	T	S									G	G	G																						T	T			T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	F	V	H	T	K	A	A	K	R	A	D	G	T	S	T	P	A	V	R	K	M	R	I	D	S	K	T	S	W	L	S	A	C	R	R	A	G	I	E	D	F	R	F	H	D	L	R	H	T	W	A	S	W	L	I	Q
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		G	M	D	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	L	N	P	T	Q	L	N	D	H	L	K	S	F	M	.	.	.	.	.	D	G	L	S	A	K	V	F	R	T	Y	N	A	S	I	T	L	D
Template Known Secondary structure		T	S	B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T											T	T	T	S	.	.	.	.	.	T	T			T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		381	.	.	.	.															.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.						.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions