Job Description P24218 Confidence 99.94% Date Thu Jan 5 11:41:20 GMT 2012 Rank 7 Aligned Residues 261 % Identity 18% Template c1a0pA_ PDB info PDB header:dna recombination Chain: A: PDB Molecule:site-specific recombinase xerd; PDBTitle: site-specific recombinase, xerd Resolution 2.50 Å

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		61	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure													.	.	.	.	.																							.	.
Query SS confidence													.	.	.	.	.																							.	.
Query Sequence		E	A	C	L	R	W	L	E	E	K	A	.	.	.	.	.	D	K	K	S	L	D	S	D	K	S	R	I	E	F	W	L	E	H	F	E	G	I	.	.	R	L	K	D	I	S	E	A	K	I	Y	S	A	V	S	R	M	H	N	R	K	T	K	E	I	W	K	Q	K	V	Q	A	A	I	R	K	G	K	E	L
Query Conservation													.	.	.	.	.																							.	.
Alig confidence													.	.	.	.	.																							.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	I	E	Q	F	L	D	A	L	W	L	E	K	N	L	A	E	N	T	L	N	A	Y	R	R	D	L	S	M	M	V	E	W	L	H	H	R	G	L	T	L	A	T	A	Q	S	D	D	L	Q	A	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T		S																						T	S			T	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	Y	E	P	K	P	V	S	T	Q	T	K	A	K	H	L	A	M	I	K	A	I	L	R	A	A	E	R	D	W	K	W	L	E	K	A	P	V	I	K	I	P	A	V	R	N	K	R	V	R	W	L	E	K	E	E	A	K	R	L	I	D	E	C	P	E	P	L	K	S	V	V	K	F	A	L	A	T	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																													.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																													.	.	.
Template Sequence		.	.	.	.	.	.	.	.	E	R	L	S	S	A	R	L	L	S	A	V	R	R	L	F	Q	Y	L	Y	R	E	K	F	R	E	D	D	P	S	A	H	L	K	D	L	S	E	A	Q	V	E	R	L	.	.	.	L	Q	A	P	L	I	D	Q	P	L	E	L	R	D	K	A	M	L	E	V	L	Y	A	T	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	S																					T	T	S	S	S	S		T	T	S														.	.	.				S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																													.	.	.
Template SS confidence
										61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	K	S	N	I	I	N	L	E	W	Q	Q	I	D	M	Q	R	R	V	A	W	V	N	P	E	E	S	K	S	N	R	A	I	G	V	A	L	N	D	T	A	C	K	V	L	R	D	Q	I	G	K	H	H	K	W	V	F	V	H	T	K	A	A	K	R	A	D	G	T	S	T	P	A	V	R	K	M	R	I
Query Conservation
Alig confidence																												.	.	.
Template Conservation																												.	.	.
Template Sequence		L	R	V	S	E	L	V	G	L	T	M	S	D	I	S	L	R	Q	G	V	V	R	V	I	G	K	.	.	.	G	N	K	E	R	L	V	P	L	G	E	E	A	V	Y	W	L	E	T	Y	L	E	H	G	R	P	W	L	L	N	G	V	S	I	D	V	L	F	P	S	Q	R	A	Q	Q	M	T	R	Q	T	F
Template Known Secondary structure								T	T		B	G	G	G			T	T	T	T							S	.	.	.	S	S																						T						T	T					B	S	S	B		T	T	S	S	B
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	K	T	S	W	L	S	A	C	R	R	A	G	I	E	D	F	R	F	H	D	L	R	H	T	W	A	S	W	L	I	Q	S	G	V	P	L	S	V	L	Q	E	M	G	G	W	E	S	I	E	M	V	R	R	Y	A	H	L	A	P	N	H	L	T	E	H	A	R
Query Conservation
Alig confidence																																																			.	.
Template Conservation																																																			.	.
Template Sequence		W	H	R	I	K	H	Y	A	V	L	A	G	I	D	S	E	K	L	S	P	H	V	L	R	H	A	F	A	T	H	L	L	N	H	G	A	D	L	R	V	V	Q	M	L	L	S	D	L	S	.	.	T	T	Q	I	Y	T	H	V	A	T	E	R	L	R	Q	L	H	Q
Template Known Secondary structure												T	T			G	G	G																			S	S		G	G	G	S	S							.	.
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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