Job Description P0AAG8 Confidence 98.09% Date Thu Jan 5 11:12:53 GMT 2012 Rank 97 Aligned Residues 178 % Identity 14% Template c3bh0A_ PDB info PDB header:replication Chain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p Resolution 2.35 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	N	V	N	L	K	V	R	P	H	S	I	H	A	L	M	G	E	N	G	A	G	K	S	T	L	L	K	C	L	F	G	I	Y	Q	K	D	S	G	T	I	L	F	Q	G	K	E	I	D	F	H	S	A	K	E	A	L	E	N	G	I	S	M	V	H	Q	E	L	N	L	V	L	Q	R	S	V	M	D	N
Query Conservation
Alig confidence																																															.	.	.																						.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		L	D	R	M	T	Y	G	Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	.	.	.	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	T	A	G	S	I	N	.	.	.	.	.	.	.	.	A	Q	K
Template Known Secondary structure							S	S	B		T	T									T	T	S	S														T	T	T							.	.	.		S	S	S														T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250									.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.								.	.	.	.	.
Predicted Secondary structure																																																											.	.										.	.	.	.	.	.	.
Query SS confidence																																																											.	.										.	.	.	.	.	.	.
Query Sequence		M	W	L	G	R	Y	P	T	K	G	M	F	V	D	Q	D	K	M	Y	R	E	T	K	A	I	F	D	E	L	D	I	D	I	D	P	R	A	R	V	G	T	L	S	V	S	Q	M	Q	M	I	E	I	A	K	A	F	S	.	.	Y	N	A	K	I	V	I	M	D	.	.	.	.	.	.	.	E	P	T	S	S
Query Conservation																																																											.	.										.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																																								.	.										.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		I	K	A	A	R	R	D	F	A	S	E	D	.	.	.	.	.	.	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D
Template Known Secondary structure				S							S	S		.	.	.	.	.	.													T	S								S			B														T	S	S	S										G	G	G	S	B		S		T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																				.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	E	K	E	V	N	H	L	F	T	I	I	R	K	L	.	K	E	R	G	C	G	I	V	Y	I	S	H	K	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	F	Q	L	C	D	E	V	T	V	L	R
Query Conservation																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	T	N	Q	I	S	Q	I	S	R	D	L	K	K	M	A	R	E	L	D	V	V	V	I	A	L	S	Q	L	S	R	Q	V	E	Q	R	Q	D	K	R	P	M	L	S	D	L	R	E	S	G	Q	L	E	Q	D	A	D	I	I	E	F	L	Y
Template Known Secondary structure																						T											G	G	G	T	T	S	S	S					G	G	G	G	T	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions