Job Description P0AAG8 Confidence 97.64% Date Thu Jan 5 11:12:53 GMT 2012 Rank 113 Aligned Residues 158 % Identity 14% Template c2zjbB_ PDB info PDB header:recombination Chain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant Resolution 3.50 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		V	R	P	H	S	I	H	A	L	M	G	E	N	G	A	G	K	S	T	L	L	K	.	.	C	L	F	G	I	Y	Q	K	D	S	G	T	I	L	F	Q	G	K	E	I	D	F	H	S	A	K	E	A	L	E	N	G	I	S	M	V	H	Q	E	L	N	L	V	L	Q	R	S	V	M	D	N	M	W	L	G	R
Query Conservation																								.	.
Alig confidence																								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	S	M	A	I	T	E	A	F	G	E	F	R	T	G	K	T	Q	L	S	H	T	L	C	V	T	A	Q	L	P	G	A	G	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	G	K	I	I	F	I	D	T	E	N	T	F	R	P	D	R	L	R	D	I	A	D	R	F	N	V
Template Known Secondary structure				S	S	S								S	S		T												T	T	S		B	T	T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S											G	G	G	G	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	P	T	K	G	M	F	V	D	Q	D	K	M	Y	R	E	T	K	A	I	F	D	E	L	D	I	D	I	D	P	R	A	R	V	G	T	L	S	V	S	Q	M	Q	M	I	E	I	A	K	A	F	S	Y	N	A	K	I	V	I	M	D	E	P	T	S	S	L	T	E	K	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	H	D	A	V	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	L	Y	A	R	A	Y	T	S	E	H	Q	V	E	L	L	D	Y	V	A	A	K	F	H	E	E	A	G	I	F	K	L	L	I	I	D	S	I	M	A	L	F	R	V	D	F	S	G	R	G	E	L	A	E	R
Template Known Secondary structure							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								S	T	T																S		S	S									S	T							S		G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.																		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
				184	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.													.
Query SS confidence		.	.													.
Query Sequence		.	.	E	V	N	H	L	F	T	I	I	R	K	L	.	K	E	R	G	C	G	I	V	Y	I	S	H	K	M	E	E	I	F	Q	L	C	D	E	V	T	V	L	R	D	G	Q
Query Conservation		.	.													.
Alig confidence		.	.													.
Template Conservation
Template Sequence		Q	Q	K	L	A	Q	M	L	S	R	L	Q	K	I	S	E	E	Y	N	V	A	V	F	V	T	N	Q	M	G	H	I	L	A	H	A	S	T	T	R	I	S	L	R	K	G	R
Template Known Secondary structure																			T	T																S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions