Job Description P0AAG8 Confidence 100.00% Date Thu Jan 5 11:12:53 GMT 2012 Rank 8 Aligned Residues 360 % Identity 16% Template c2ygrD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra Resolution 3.40 Å

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		132	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																												.	.
Query SS confidence													.																												.	.
Query Sequence		A	I	F	D	E	L	D	I	D	I	D	.	P	R	A	R	V	G	T	L	S	V	S	Q	M	Q	M	I	E	I	A	K	A	F	S	Y	N	A	K	.	.	I	V	I	M	D	E	P	T	S	S	L	T	E	K	E	V	N	H	L	F	T	I	I	R	K	L	K	E	R	G	C	G	I	V	Y	I	S	H	K
Query Conservation													.																												.	.
Alig confidence													.																												.	.
Template Conservation
Template Sequence		G	F	L	L	D	V	G	L	E	Y	L	S	L	S	R	A	A	A	T	L	S	G	G	E	A	Q	R	I	R	L	A	T	Q	I	G	S	G	L	V	G	V	L	Y	V	L	D	E	P	S	I	G	L	H	Q	R	D	N	R	R	L	I	E	T	L	T	R	L	R	D	L	G	N	T	L	I	V	V	E	H	D
Template Known Secondary structure							T	T		T	T	S		T	T	S	B	G	G	G																T	T				S								T	T	T	T																											B
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.							.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		M	E	E	I	F	Q	L	C	D	E	V	T	V	L	.	.	.	.	.	.	R	D	G	Q	W	I	A	T	E	P	L	A	G	L	T	M	D	K	I	I	A	M	M	V	G	R	S	L	N	Q	R	F	P	D	K	E	N	K	P	G	E	V	I	L	E	V	R	N	L	T	S	L	R	Q	P	S	I	R	D	V
Query Conservation																.	.	.	.	.	.
Alig confidence						.										.	.	.	.	.	.
Template Conservation						.
Template Sequence		E	D	T	I	.	E	H	A	D	W	I	V	D	I	G	P	G	A	G	E	H	G	G	R	I	V	H	S	G	P	Y	D	E	L	L	R	N	K	D	S	I	T	G	A	Y	L	S	G	R	E	S	I	E	I	P	A	I	R	R	S	V	D	P	R	R	Q	L	T	V	V	G	A	R	E	H	N	L	R	G	I
Template Known Secondary structure						.		T		S						S	S	S	S	G	G	G			S														S	S									T	S							S	S						T	T	S									S	T	T			S
Template Predicted Secondary structure						.
Template SS confidence
		562	.	.	.		.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		S	F	D	L	H	K	G	E	I	L	G	I	A	G	L	V	G	A	K	R	T	D	I	V	E	.	.	T	L	F	G	I	R	E	K	S	A	G	T	I	T	L	H	G	K	Q	I	N	N	H	N	A	N	E	A	I	N	H	G	F	A	L	V	T	E	E	R	R	S	T	G	I	Y	A	Y	L	D	I	G	F
Query Conservation																											.	.
Alig confidence																											.	.																												.	.
Template Conservation																																																								.	.
Template Sequence		D	V	S	F	P	L	G	V	L	T	S	V	T	G	V	S	G	S	G	K	S	T	L	V	N	D	I	L	A	A	V	L	A	N	R	L	N	G	A	R	Q	V	P	G	R	H	T	R	V	T	G	L	D	Y	.	.	L	D	K	L	V	R	I	D	Q	S	P	I	G	R	T	P	R	S	N	P	A	T	Y	T
Template Known Secondary structure							S	S	S							S	T	T	S	S								T									T	S								S	S						G	G	G	.	.										S		S		S	S	T	T		S
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.			.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	S	L	I	S	N	I	R	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	F	D	K	I	R	T	L	F	A	A	T	N	E	A	K	V	R	G	Y	K	P	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	T	G	D	G	T	I	K	I	E	M	N	F	L	P	D	V	Y	V	P	C	E	V	C	Q	G	A	R	Y	N	R	E	T	L	E	V	H	Y	K	G	K	T	V
Template Known Secondary structure		T											T	S					T	T	T			G	G	G	S		T	T	S	T	T	T	B		S	S	S	T	T	S	S							S	S	S								T	T	T	T	S		S	B						T			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.
										371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.				.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																							.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																							.	.	.
Query Sequence		.	.	.	.	.	.	.	.	K	N	K	V	G	L	L	D	N	S	R	M	K	S	D	T	Q	W	V	I	D	S	M	R	V	K	T	P	G	H	R	T	Q	I	G	S	L	S	G	G	N	Q	Q	K	V	I	I	G	R	W	L	L	T	Q	.	.	.	P	E	I	L	M	L	D	E	P	T	R	G	I	D	V
Query Conservation		.	.	.	.	.	.	.	.																																																							.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																							.	.	.
Template Conservation
Template Sequence		S	E	V	L	D	M	S	I	E	E	A	A	E	F	F	E	P	I	A	G	V	H	R	Y	L	R	T	L	V	D	V	G	L	G	Y	V	R	L	G	Q	P	A	P	T	L	S	G	G	E	A	Q	R	V	K	L	A	S	E	L	Q	K	R	S	T	G	R	T	V	Y	I	L	D	E	P	T	T	G	L	H	F
Template Known Secondary structure						T	S	B								S	T	T														S	S		S	S	S	B	T	T			G	G	G	S														S	S	S				S	S							S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		799	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.							480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.
Query Sequence		G	A	K	F	E	I	Y	Q	L	I	A	E	L	A	K	K	G	K	G	I	I	I	I	S	S	E	M	P	E	L	L	G	I	T	D	R	I	L	V	M	.	.	.	.	.	.	S	N	G	L	V	S	G	I	V	D	T	K	T	T	T	Q
Query Conservation																																										.	.	.	.	.	.
Alig confidence																																		.								.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		D	D	I	R	K	L	L	N	V	I	N	G	L	V	D	K	G	N	T	V	I	V	I	E	H	N	L	D	V	I	K	T	.	S	D	W	I	I	D	L	G	P	E	G	G	A	G	G	G	T	V	V	A	Q	G	T	P	E	D	V	A	A
Template Known Secondary structure																		T																.		S							S	S	S	T	T	S		S						S						T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		879	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910		.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.