Job Description P0AAG8 Confidence 100.00% Date Thu Jan 5 11:12:53 GMT 2012 Rank 19 Aligned Residues 217 % Identity 25% Template c2pcjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lipoprotein-releasing system atp-binding protein lold; PDBTitle: crystal structure of abc transporter (aq_297) from aquifex aeolicus2 vf5 Resolution 1.70 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		Y	L	L	E	M	S	G	I	N	K	S	F	P	G	V	K	A	L	D	N	V	N	L	K	V	R	P	H	S	I	H	A	L	M	G	E	N	G	A	G	K	S	T	L	L	K	C	L	F	G	I	Y	Q	K	D	S	G	T	I	L	F	Q	G	K	E	I	D	F	H	S	A	K	E	A	L	.	.	.	E	N
Query Conservation																																																																													.	.	.
Alig confidence																																																																													.	.	.
Template Conservation
Template Sequence		E	I	L	R	A	E	N	I	K	K	V	I	R	G	Y	E	I	L	K	G	I	S	L	S	V	K	K	G	E	F	V	S	I	I	G	A	S	G	S	G	K	S	T	L	L	Y	I	L	G	L	L	D	A	P	T	E	G	K	V	F	L	E	G	K	E	V	D	Y	T	N	E	K	E	L	S	L	L	R	N	R
Template Known Secondary structure														T	T													T	T									T	T	S										T	T	S	S			S							T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	M	V	H	Q	E	L	N	L	V	L	Q	R	S	V	M	D	N	M	W	L	G	R	Y	P	T	K	G	M	F	V	D	Q	D	K	M	Y	R	E	T	K	A	I	F	D	E	L	D	I	D	I	D	P	R	A	R	V	G	T	L	S	V	S	Q	M	Q	M	I	E	I	A	K	A	F	S	Y	N	A
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		K	L	G	F	V	F	Q	F	H	Y	L	I	P	E	L	T	A	L	E	N	V	I	.	.	.	V	P	M	L	K	M	G	K	P	K	K	E	A	K	E	R	G	E	Y	L	L	S	E	L	G	L	G	D	K	L	S	R	K	P	Y	E	L	S	G	G	E	Q	Q	R	V	A	I	A	R	A	L	A	N	E	P
Template Known Secondary structure								S	S					T	T	S								.	.	.						T	T																	T	T		T	T		T	T			G	G	G	S															T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	V	I	M	D	E	P	T	S	S	L	T	E	K	E	V	N	H	L	F	T	I	I	R	K	L	K	E	R	G	C	G	I	V	Y	I	S	H	K	M	E	E	I	F	Q	L	C	D	E	V	T	V	L	R	D	G	Q	W	I	A	T	E	P
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		I	L	L	F	A	D	E	P	T	G	N	L	D	S	A	N	T	K	R	V	M	D	I	F	L	K	I	N	E	G	G	T	S	I	V	M	V	T	H	E	R	E	L	A	.	E	L	T	H	R	T	L	E	M	K	D	G	K	V	V	G	E	I	T
Template Known Secondary structure		S						S	T	T	T	T	S																		T	T								S						.	T	T	S	S							T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions