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Job DescriptionP0AAG8
Confidence100.00%DateThu Jan 5 11:12:53 GMT 2012
Rank13Aligned Residues226
% Identity26%Templatec2olkD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:amino acid abc transporter; PDBTitle: abc protein artp in complex with adp-beta-s
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   13......20.........30.........40.........50.........60.........70.........80... ......90.
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Query Sequence  LLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAK. EALENGIS
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Template Sequence  MIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKVREEVG
Template Known Secondary structure  SSSS

TT

STTSSTTSS

STTTTSTT

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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  MVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIV
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Template Sequence  MVFQRFNLFPHMTVLNNITL. . APMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIM
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SS

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TTS
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TT
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GGGS
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   81........90.........100 .........110.........120.........130.........140.........150........
 
   172.......180.........190.........200.........210.........220.........230.........240
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Query Sequence  IMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDK
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Template Sequence  LFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRP
Template Known Secondary structure  SSSTTS
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   159160.........170.........180.........190.........200.........210.........220.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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