Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAG8
Confidence97.01%DateThu Jan 5 11:12:53 GMT 2012
Rank157Aligned Residues159
% Identity14%Templatec2dflA_
PDB info PDB header:recombinationChain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: crystal structure of left-handed rada filament
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  VRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYP
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Template Sequence  IETRTMTEFFGEFGSGKTQLCHQLSVNVQLPP. . . . . . . . . . . . . . . . EKGGLSGKAVYIDTEGTFRWERIENM. . . . . .
Template Known Secondary structure  B
TTSSTTSSTTSSS
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   104.....110.........120.........130..... ....140.........150.........160.
 
   116...120.........130.........140.........150.........160.........170.... .....180...
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Query Sequence  TKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMD. . . . . . . . . . . . EPTSSLTEK
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Template Sequence  AKALGLDIDNVMN. . . . . . . . . NIYYIRAINTDHQIAIVDDLQELVSK. DPSIKLIVVDSVTSHFRAEYPGRENLAVRQQ
Template Known Secondary structure  T

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   162.......170.... .....180.........190.........200 .........210.........220.........230.
 
   184.....190..... ....200.........210.........220......
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Query Sequence  EVNHLFTIIRKL. KERGCGIVYISHKMEEIFQLCDEVTVLRDGQ
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Template Sequence  KLNKHLHQLTRLAEVYDIAVIITNQVMHTLYHVPGIRIQLKKSR
Template Known Secondary structure  TTT






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   232.......240.........250.........260.........270.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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