Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAG8
Confidence97.63%DateThu Jan 5 11:12:53 GMT 2012
Rank115Aligned Residues152
% Identity17%Templatec1szpC_
PDB info PDB header:dna binding proteinChain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60 .........70.........80.........90.........100.........
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Query Sequence  VRPHSIHALMGENGAGKSTLLKCLF. . . . . . GIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNM
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Template Sequence  VETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVR. . . . . . . . . . LVSIAQRFGLDPDDAL
Template Known Secondary structure  SSSSTTSSTTS
TTTT

SSSSS


GGG..........GT


G
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   175....180.........190.........200.........210.........220........ .230.........240....
 
   110.........120.........130.........140.........150.........160.........170.........180.....
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Query Sequence  WLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEV. . . .
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Template Sequence  NNVAYARAYNADHQLRLLDAAAQMMSE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . SRFSLIVVDSVMALYRELSARQMH
Template Known Secondary structure  GG

STTT.............................S

TTGGG

T
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   245....250.........260.........270. ........280.........290.....
 
   186...190..... ....200.........210. ........220......
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Query Sequence  . NHLFTIIRKL. KERGCGIVYISHKMEE. IFQLCDEVTVLRDGQ
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Template Sequence  LAKFMRALQRLADQFGVAVVVTNQVGGNIMAHSSTTRLGFKKGK
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S

S
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   303......310.........320.........330.........340......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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