Job Description P32714 Confidence 1.90% Date Thu Jan 5 11:50:35 GMT 2012 Rank 86 Aligned Residues 57 % Identity 16% Template c1gl2C_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:vesicle transport v-snare protein vti1-like 1; PDBTitle: crystal structure of an endosomal snare core complex Resolution 1.9 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	T	H	D	V	I	D	Y	A	V	K	A	H	Q	S	K	V	A	H	G	L	E	A	Q	V	P	F	H	G	A	R	A	Q	I	L	A	V	D	K	Q	I	V	A	V	K	G	Q	I	T	E	T	R	E	S	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	A	T	Q	S	I	E	R	S	H	R	I	A	T	E	T	D	Q	I	G	T	E	I	I	E	E	L	G	E	Q	R	D	Q	L	E	R	T	K	S	R	L	V	N	T	N	E	N	L	S	K	S	R	K	I	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions