Job Description P45955 Confidence 99.38% Date Thu Jan 5 12:03:52 GMT 2012 Rank 63 Aligned Residues 145 % Identity 10% Template c3q75A_ PDB info PDB header:transferase Chain: A: PDB Molecule:farnesyltransferase alpha subunit; PDBTitle: cryptococcus neoformans protein farnesyltransferase in complex with2 fpt-ii and tkcvvm peptide Resolution 2.14 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		S	T	S	G	D	Q	S	G	A	A	A	S	T	T	P	T	A	D	A	G	T	A	N	A	G	A	P	V	K	S	G	N	A	N	T	D	Y	N	A	A	I	A	L	V	Q	D	K	S	R	.	Q	D	D	A	M	V	A	F	Q	N	F	I	K	N	Y	P	D	S	T	Y	L	P	N	A	N	Y	W	L	G	Q
Query Conservation																																																			.
Alig confidence																																																			.																				.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		D	A	M	D	Y	F	R	A	I	A	A	K	E	E	K	S	E	R	A	L	E	L	T	E	I	I	V	R	M	N	P	A	H	Y	T	V	W	Q	Y	R	F	S	L	L	T	S	L	N	K	S	L	E	D	E	L	R	L	M	N	E	F	A	V	Q	N	L	K	S	Y	.	.	.	Q	V	W	H	H	R	L	L
Template Known Secondary structure														T			S															T	T															T	T																	T	T	T			.	.	.
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.
		189	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																																						.	.	.	.	.	.	.	.
Query SS confidence									.	.																																						.	.	.	.	.	.	.	.
Query Sequence		L	N	Y	N	K	G	K	.	.	K	D	D	A	A	Y	Y	F	A	S	V	V	K	N	Y	P	K	S	P	K	A	A	D	A	M	F	K	V	G	V	I	M	Q	D	K	G	D	.	.	.	.	.	.	.	.	T	A	K	A	K	A	V	Y	Q	Q	V	I	S	K	Y	P	G	T	D	G	A	K	Q	A	Q	K
Query Conservation									.	.																																						.	.	.	.	.	.	.	.
Alig confidence									.	.												.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																						.	.	.
Template Sequence		L	L	D	R	I	S	P	Q	D	P	V	S	E	I	E	Y	I	H	G	S	.	.	.	L	L	P	D	P	K	N	Y	H	T	W	A	Y	L	H	W	L	Y	S	H	F	S	T	L	G	R	I	S	E	A	Q	W	G	S	E	L	D	W	C	N	E	M	L	R	V	D	G	R	N	N	S	A	W	G	W	R	W
Template Known Secondary structure									S													.	.	.	T	S	S		T	T																		T	T																						T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		259	260
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		195	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions